RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
SPARC-205ENST00000522348 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
SPARC-205ENST00000522348 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
SPARC-205ENST00000522348 MRIQ9BWK5 157 aa11.37□□□□□ -0.59
SPARC-205ENST00000522348 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
SPARC-205ENST00000522348 ARPP21Q9UBL0 812 aaPredicted RBP11.37□□□□□ -0.59
SPARC-205ENST00000522348 MTMR6Q9Y217 621 aa11.37□□□□□ -0.59
SPARC-205ENST00000522348 NEDD4P46934 1319 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 CPLX1O14810 134 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 PRPF40AO75400 957 aaKnown RBP11.36□□□□□ -0.59
SPARC-205ENST00000522348 CDKL5O76039 1030 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 FKBP1AP62942 108 aaKnown RBP11.36□□□□□ -0.59
SPARC-205ENST00000522348 PDE4BQ07343 736 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 PPP2R5BQ15173 497 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 GRIK5Q16478 980 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
SPARC-205ENST00000522348 NFXL1Q6ZNB6 911 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 TTLL6Q8N841 843 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 NSUN7Q8NE18 718 aaKnown RBP11.36□□□□□ -0.59
SPARC-205ENST00000522348 INCENPQ9NQS7 918 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
SPARC-205ENST00000522348 LMBRD1Q9NUN5 540 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 MCM9Q9NXL9 1143 aa11.36□□□□□ -0.59
SPARC-205ENST00000522348 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 H3BQV1 296 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 ORC4O43929 436 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 CTDNEP1O95476 244 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 NCLP19338 710 aaKnown RBP11.35□□□□□ -0.59
SPARC-205ENST00000522348 RCAN1P53805 252 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 WTAPQ15007 396 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 RTKN2Q8IZC4 609 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 UBAC1Q9BSL1 405 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 ZSCAN16Q9H4T2 348 aaPredicted RBP11.35□□□□□ -0.59
SPARC-205ENST00000522348 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 ZNF287Q9HBT7 754 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
SPARC-205ENST00000522348 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 TACC3Q9Y6A5 838 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 CACNA1SQ13698 1873 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 ANKRD31Q8N7Z5 1873 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 MYO5AQ9Y4I1 1855 aaKnown RBP11.35□□□□□ -0.59
SPARC-205ENST00000522348 QSER1Q2KHR3 1735 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 GAKO14976 1311 aa11.35□□□□□ -0.59
SPARC-205ENST00000522348 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 PTPDC1A2A3K4 754 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 VPS37CA5D8V6 355 aaPredicted RBP11.34□□□□□ -0.59
SPARC-205ENST00000522348 ZBTB43O43298 467 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 JAK2O60674 1132 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 BTDP43251 543 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 METAP2P50579 478 aaKnown RBP eCLIP11.34□□□□□ -0.59
SPARC-205ENST00000522348 TGFB2P61812 414 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 C12orf60Q5U649 245 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 STRIP1Q5VSL9 837 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 HHIPL2Q6UWX4 724 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 IQCA1Q86XH1 822 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 SH3RF3Q8TEJ3 882 aaPredicted RBP11.34□□□□□ -0.59
SPARC-205ENST00000522348 FBXW7Q969H0 707 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
SPARC-205ENST00000522348 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 NCOA5Q9HCD5 579 aaKnown RBP11.34□□□□□ -0.59
SPARC-205ENST00000522348 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
SPARC-205ENST00000522348 LRRC37AA6NMS7 1700 aa11.34□□□□□ -0.59
SPARC-205ENST00000522348 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
SPARC-205ENST00000522348 RANBP6O60518 1105 aaKnown RBP11.33□□□□□ -0.6
SPARC-205ENST00000522348 POLR3DP05423 398 aaPredicted RBP11.33□□□□□ -0.6
SPARC-205ENST00000522348 HDLBPQ00341 1268 aaKnown RBP11.33□□□□□ -0.6
SPARC-205ENST00000522348 SOGA3Q5TF21 947 aa11.33□□□□□ -0.6
SPARC-205ENST00000522348 APOA5Q6Q788 366 aa11.33□□□□□ -0.6
SPARC-205ENST00000522348 TEX11Q8IYF3 940 aa11.33□□□□□ -0.6
SPARC-205ENST00000522348 TGFBRAP1Q8WUH2 860 aa11.33□□□□□ -0.6
SPARC-205ENST00000522348 ZNF219Q9P2Y4 722 aaPredicted RBP11.33□□□□□ -0.6
SPARC-205ENST00000522348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPARC-205ENST00000522348 CYP2D7A0A087X1C5 515 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 USP17L3A6NCW0 530 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 USP17L4A6NCW7 530 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 GOLGA8AA7E2F4 631 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 MBD3O95983 291 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 PTGER2P43116 358 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 KIAA2012Q0VF49 1180 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 CCDC93Q567U6 631 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 USP17L1Q7RTZ2 530 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 USP48Q86UV5 1035 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 STK11IPQ8N1F8 1099 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 TMEM87AQ8NBN3 555 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 NKX2-3Q8TAU0 364 aa11.32□□□□□ -0.6
SPARC-205ENST00000522348 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
SPARC-205ENST00000522348 C21orf2O43822 256 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 ECE2O60344 883 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms