RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 OTOP1Q7RTM1 612 aa25.46■■□□□ 1.67
SDCBP-209ENST00000522243 NSUN4Q96CB9 384 aaKnown RBP25.46■■□□□ 1.67
SDCBP-209ENST00000522243 GPR75-ASB3A0A0A6YYF3 556 aa25.45■■□□□ 1.66
SDCBP-209ENST00000522243 SP3Q02447 781 aa25.45■■□□□ 1.66
SDCBP-209ENST00000522243 PPATQ06203 517 aa25.45■■□□□ 1.66
SDCBP-209ENST00000522243 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.45■■□□□ 1.66
SDCBP-209ENST00000522243 ERO1AQ96HE7 468 aa25.45■■□□□ 1.66
SDCBP-209ENST00000522243 ZFYVE28Q9HCC9 887 aa25.45■■□□□ 1.66
SDCBP-209ENST00000522243 LRP2BPQ9P2M1 347 aa25.45■■□□□ 1.66
SDCBP-209ENST00000522243 NOP58Q9Y2X3 529 aaKnown RBP25.45■■□□□ 1.66
SDCBP-209ENST00000522243 DDTLA6NHG4 134 aaPredicted RBP25.44■■□□□ 1.66
SDCBP-209ENST00000522243 LDHCP07864 332 aa25.44■■□□□ 1.66
SDCBP-209ENST00000522243 RHBDL3P58872 404 aa25.44■■□□□ 1.66
SDCBP-209ENST00000522243 GSTO1P78417 241 aa25.44■■□□□ 1.66
SDCBP-209ENST00000522243 CCDC158Q5M9N0 1113 aa25.44■■□□□ 1.66
SDCBP-209ENST00000522243 CEP85Q6P2H3 762 aa25.44■■□□□ 1.66
SDCBP-209ENST00000522243 BTBD19C9JJ37 291 aa25.43■■□□□ 1.66
SDCBP-209ENST00000522243 CAP1Q01518 475 aa25.43■■□□□ 1.66
SDCBP-209ENST00000522243 CCDC8Q9H0W5 538 aaPredicted RBP25.43■■□□□ 1.66
SDCBP-209ENST00000522243 ATRNL1Q5VV63 1379 aa25.43■■□□□ 1.66
SDCBP-209ENST00000522243 NOL9Q5SY16 702 aaKnown RBP25.42■■□□□ 1.66
SDCBP-209ENST00000522243 TLR7Q9NYK1 1049 aaKnown RBP25.42■■□□□ 1.66
SDCBP-209ENST00000522243 MYO5AQ9Y4I1 1855 aaKnown RBP25.42■■□□□ 1.66
SDCBP-209ENST00000522243 DBNLQ9UJU6 430 aaKnown RBP25.41■■□□□ 1.66
SDCBP-209ENST00000522243 PHF20L1A8MW92 1017 aa25.4■■□□□ 1.66
SDCBP-209ENST00000522243 EAF2Q96CJ1 260 aaPredicted RBP25.4■■□□□ 1.66
SDCBP-209ENST00000522243 EFCC1Q9HA90 598 aa25.4■■□□□ 1.66
SDCBP-209ENST00000522243 EXOC6BQ9Y2D4 811 aa25.4■■□□□ 1.66
SDCBP-209ENST00000522243 KCNH4Q9UQ05 1017 aa25.39■■□□□ 1.66
SDCBP-209ENST00000522243 MAST2Q6P0Q8 1798 aa25.39■■□□□ 1.65
SDCBP-209ENST00000522243 CYP2E1P05181 493 aaPredicted RBP25.38■■□□□ 1.65
SDCBP-209ENST00000522243 MS4A1P11836 297 aa25.38■■□□□ 1.65
SDCBP-209ENST00000522243 ZAP70P43403 619 aa25.38■■□□□ 1.65
SDCBP-209ENST00000522243 NAA16Q6N069 864 aaPredicted RBP25.38■■□□□ 1.65
SDCBP-209ENST00000522243 SCYL3Q8IZE3 742 aa25.38■■□□□ 1.65
SDCBP-209ENST00000522243 PTPN22Q9Y2R2 807 aa25.38■■□□□ 1.65
SDCBP-209ENST00000522243 COG6Q9Y2V7 657 aa25.38■■□□□ 1.65
SDCBP-209ENST00000522243 FAM196BA6NMK8 535 aa25.37■■□□□ 1.65
SDCBP-209ENST00000522243 TLR2O60603 784 aa25.37■■□□□ 1.65
SDCBP-209ENST00000522243 MAP3K10Q02779 954 aa25.37■■□□□ 1.65
SDCBP-209ENST00000522243 SH3RF3Q8TEJ3 882 aaPredicted RBP25.37■■□□□ 1.65
SDCBP-209ENST00000522243 ZCCHC17Q9NP64 241 aaKnown RBP25.37■■□□□ 1.65
SDCBP-209ENST00000522243 PICK1Q9NRD5 415 aa25.37■■□□□ 1.65
SDCBP-209ENST00000522243 ZSWIM8A7E2V4 1837 aa25.37■■□□□ 1.65
SDCBP-209ENST00000522243 ECM2O94769 699 aaPredicted RBP25.36■■□□□ 1.65
SDCBP-209ENST00000522243 TEX11Q8IYF3 940 aa25.36■■□□□ 1.65
SDCBP-209ENST00000522243 ZNF512BQ96KM6 892 aaPredicted RBP25.36■■□□□ 1.65
SDCBP-209ENST00000522243 NOL10Q9BSC4 688 aaKnown RBP25.36■■□□□ 1.65
SDCBP-209ENST00000522243 AATFQ9NY61 560 aaKnown RBP eCLIP25.36■■□□□ 1.65
SDCBP-209ENST00000522243 ZHX2Q9Y6X8 837 aa25.36■■□□□ 1.65
SDCBP-209ENST00000522243 DOCK1Q14185 1865 aa25.36■■□□□ 1.65
SDCBP-209ENST00000522243 PDHXO00330 501 aa25.35■■□□□ 1.65
SDCBP-209ENST00000522243 NPM3O75607 178 aaKnown RBP25.35■■□□□ 1.65
SDCBP-209ENST00000522243 PTPRAP18433 802 aa25.35■■□□□ 1.65
SDCBP-209ENST00000522243 MOGSQ13724 837 aa25.35■■□□□ 1.65
SDCBP-209ENST00000522243 ANKRD23Q86SG2 305 aa25.35■■□□□ 1.65
SDCBP-209ENST00000522243 OSBPL5Q9H0X9 879 aaPredicted RBP25.35■■□□□ 1.65
SDCBP-209ENST00000522243 PIH1D3Q9NQM4 214 aaKnown RBP25.35■■□□□ 1.65
SDCBP-209ENST00000522243 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.35■■□□□ 1.65
SDCBP-209ENST00000522243 RCAN3Q9UKA8 241 aa25.35■■□□□ 1.65
SDCBP-209ENST00000522243 MAP4K4O95819 1239 aaPredicted RBP25.34■■□□□ 1.65
SDCBP-209ENST00000522243 ADGRA1Q86SQ6 560 aa25.34■■□□□ 1.65
SDCBP-209ENST00000522243 AACSQ86V21 672 aa25.34■■□□□ 1.65
SDCBP-209ENST00000522243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.34■■□□□ 1.65
SDCBP-209ENST00000522243 CTNND1O60716 968 aaKnown RBP25.33■■□□□ 1.65
SDCBP-209ENST00000522243 CCDC84Q86UT8 332 aaPredicted RBP25.33■■□□□ 1.65
SDCBP-209ENST00000522243 ERC1Q8IUD2 1116 aa25.33■■□□□ 1.65
SDCBP-209ENST00000522243 ARHGAP39Q9C0H5 1083 aa25.33■■□□□ 1.65
SDCBP-209ENST00000522243 IL1RAPL2Q9NP60 686 aa25.33■■□□□ 1.65
SDCBP-209ENST00000522243 CPA4Q9UI42 421 aa25.33■■□□□ 1.65
SDCBP-209ENST00000522243 NDUFB9Q9Y6M9 179 aa25.33■■□□□ 1.65
SDCBP-209ENST00000522243 CDK5RAP2Q96SN8 1893 aa25.32■■□□□ 1.64
SDCBP-209ENST00000522243 CXCL11O14625 94 aa25.32■■□□□ 1.64
SDCBP-209ENST00000522243 BAG3O95817 575 aa25.32■■□□□ 1.64
SDCBP-209ENST00000522243 DDX19BQ9UMR2 479 aa25.32■■□□□ 1.64
SDCBP-209ENST00000522243 PHIPQ8WWQ0 1821 aa25.32■■□□□ 1.64
SDCBP-209ENST00000522243 APBB1O00213 710 aa25.31■■□□□ 1.64
SDCBP-209ENST00000522243 TBC1D12O60347 775 aa25.31■■□□□ 1.64
SDCBP-209ENST00000522243 ARHGEF6Q15052 776 aa25.31■■□□□ 1.64
SDCBP-209ENST00000522243 GPAT2Q6NUI2 795 aa25.31■■□□□ 1.64
SDCBP-209ENST00000522243 TGFBRAP1Q8WUH2 860 aa25.31■■□□□ 1.64
SDCBP-209ENST00000522243 BCL11AQ9H165 835 aa25.31■■□□□ 1.64
SDCBP-209ENST00000522243 AFG3L2Q9Y4W6 797 aa25.31■■□□□ 1.64
SDCBP-209ENST00000522243 LACTBP83111 547 aaPredicted RBP25.3■■□□□ 1.64
SDCBP-209ENST00000522243 KIF22Q14807 665 aa25.3■■□□□ 1.64
SDCBP-209ENST00000522243 C17orf99Q6UX52 265 aa25.3■■□□□ 1.64
SDCBP-209ENST00000522243 GADL1Q6ZQY3 521 aa25.3■■□□□ 1.64
SDCBP-209ENST00000522243 RHPN1Q8TCX5 695 aa25.3■■□□□ 1.64
SDCBP-209ENST00000522243 ZBTB40Q9NUA8 1239 aa25.3■■□□□ 1.64
SDCBP-209ENST00000522243 ATAD5Q96QE3 1844 aa25.3■■□□□ 1.64
SDCBP-209ENST00000522243 PTPRFP10586 1907 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 COL2A1P02458 1487 aaPredicted RBP25.29■■□□□ 1.64
SDCBP-209ENST00000522243 A0A0G2JLL6 359 aaPredicted RBP25.29■■□□□ 1.64
SDCBP-209ENST00000522243 IDH1O75874 414 aaKnown RBP25.29■■□□□ 1.64
SDCBP-209ENST00000522243 PLCG2P16885 1265 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 CYP7A1P22680 504 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 PPP4CP60510 307 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 DYNLL1P63167 89 aaKnown RBP25.29■■□□□ 1.64
SDCBP-209ENST00000522243 HSP90AB4PQ58FF6 505 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 PRRT2Q7Z6L0 340 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms