RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 NDUFB9Q9Y6M9 179 aa21.85■■□□□ 1.09
TRAPPC9-211ENST00000521700 TESPA1A2RU30 521 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 DDTLA6NHG4 134 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 SPDYE5A6NIY4 337 aa21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 IGF2BP3O00425 579 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 IGSF3O75054 1194 aa21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 NPM3O75607 178 aaKnown RBP21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 RRP1P56182 461 aaKnown RBP21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 ZSCAN29Q8IWY8 852 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 OTUD5Q96G74 571 aa21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 MS4A4AQ96JQ5 239 aa21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 BCL11AQ9H165 835 aa21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 ATRNL1Q5VV63 1379 aa21.84■■□□□ 1.09
TRAPPC9-211ENST00000521700 IFIT2P09913 472 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-211ENST00000521700 ADGRA1Q86SQ6 560 aa21.83■■□□□ 1.09
TRAPPC9-211ENST00000521700 ERO1BQ86YB8 467 aa21.83■■□□□ 1.09
TRAPPC9-211ENST00000521700 PTPN18Q99952 460 aa21.83■■□□□ 1.09
TRAPPC9-211ENST00000521700 CFHR5Q9BXR6 569 aa21.83■■□□□ 1.09
TRAPPC9-211ENST00000521700 R3HDMLQ9H3Y0 253 aa21.83■■□□□ 1.09
TRAPPC9-211ENST00000521700 ANTXR1Q9H6X2 564 aa21.83■■□□□ 1.09
TRAPPC9-211ENST00000521700 CAPN15O75808 1086 aa21.82■■□□□ 1.08
TRAPPC9-211ENST00000521700 ALDH1A1P00352 501 aa21.82■■□□□ 1.08
TRAPPC9-211ENST00000521700 PPP4CP60510 307 aa21.82■■□□□ 1.08
TRAPPC9-211ENST00000521700 SH3RF3Q8TEJ3 882 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC9-211ENST00000521700 AATFQ9NY61 560 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRAPPC9-211ENST00000521700 MAST2Q6P0Q8 1798 aa21.82■■□□□ 1.08
TRAPPC9-211ENST00000521700 DOCK2Q92608 1830 aa21.81■■□□□ 1.08
TRAPPC9-211ENST00000521700 IDH1O75874 414 aaKnown RBP21.81■■□□□ 1.08
TRAPPC9-211ENST00000521700 BAG3O95817 575 aa21.81■■□□□ 1.08
TRAPPC9-211ENST00000521700 SLURP2P0DP57 97 aa21.81■■□□□ 1.08
TRAPPC9-211ENST00000521700 MAP3K10Q02779 954 aa21.81■■□□□ 1.08
TRAPPC9-211ENST00000521700 TEX11Q8IYF3 940 aa21.81■■□□□ 1.08
TRAPPC9-211ENST00000521700 NOL10Q9BSC4 688 aaKnown RBP21.81■■□□□ 1.08
TRAPPC9-211ENST00000521700 PHF20L1A8MW92 1017 aa21.8■■□□□ 1.08
TRAPPC9-211ENST00000521700 GPR25O00155 361 aa21.8■■□□□ 1.08
TRAPPC9-211ENST00000521700 GTF2A2P52657 109 aa21.8■■□□□ 1.08
TRAPPC9-211ENST00000521700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.8■■□□□ 1.08
TRAPPC9-211ENST00000521700 ZNF296Q8WUU4 475 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC9-211ENST00000521700 BRI3BPQ8WY22 251 aa21.8■■□□□ 1.08
TRAPPC9-211ENST00000521700 CYP7A1P22680 504 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 PPIL2Q13356 520 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 DGKZQ13574 1117 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 NOM1Q5C9Z4 860 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 NOL9Q5SY16 702 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 OTUD7BQ6GQQ9 843 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 LRRCC1Q9C099 1032 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 MCOLN1Q9GZU1 580 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 OSBPL5Q9H0X9 879 aaPredicted RBP21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 DCTPP1Q9H773 170 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 PCDHB15Q9Y5E8 787 aa21.79■■□□□ 1.08
TRAPPC9-211ENST00000521700 CCL15-CCL14A0A0B4J2E2 113 aa21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 IRF6O14896 467 aa21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 SMARCA5O60264 1052 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 PLCG2P16885 1265 aa21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 DYNLL1P63167 89 aaKnown RBP21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 PPATQ06203 517 aa21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 CCL15Q16663 113 aa21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 MAGEB6Q8N7X4 407 aa21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 ABHD8Q96I13 439 aa21.78■■□□□ 1.08
TRAPPC9-211ENST00000521700 MAP3K12Q12852 859 aa21.77■■□□□ 1.08
TRAPPC9-211ENST00000521700 TBC1D12O60347 775 aa21.76■■□□□ 1.07
TRAPPC9-211ENST00000521700 TTF1Q15361 905 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC9-211ENST00000521700 TGFBRAP1Q8WUH2 860 aa21.76■■□□□ 1.07
TRAPPC9-211ENST00000521700 CRBNQ96SW2 442 aa21.76■■□□□ 1.07
TRAPPC9-211ENST00000521700 COL2A1P02458 1487 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC9-211ENST00000521700 GOLIM4O00461 696 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 CETPP11597 493 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 ATP5JP18859 108 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 CRHR2Q13324 411 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 SNAPC2Q13487 334 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 MAPKAPK5Q8IW41 473 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 MIGA1Q8NAN2 632 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 DNAJC2Q99543 621 aaKnown RBP21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 BOLA2Q9H3K6 86 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 CDK5RAP2Q96SN8 1893 aa21.75■■□□□ 1.07
TRAPPC9-211ENST00000521700 FAM196BA6NMK8 535 aa21.74■■□□□ 1.07
TRAPPC9-211ENST00000521700 FKTNO75072 461 aa21.74■■□□□ 1.07
TRAPPC9-211ENST00000521700 TMED8Q6PL24 325 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC9-211ENST00000521700 CTU1Q7Z7A3 348 aaKnown RBP21.74■■□□□ 1.07
TRAPPC9-211ENST00000521700 SCYL3Q8IZE3 742 aa21.74■■□□□ 1.07
TRAPPC9-211ENST00000521700 FAM43AQ8N2R8 423 aa21.74■■□□□ 1.07
TRAPPC9-211ENST00000521700 EDC3Q96F86 508 aaKnown RBP21.74■■□□□ 1.07
TRAPPC9-211ENST00000521700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.74■■□□□ 1.071e-6■■■■■ 59.1
TRAPPC9-211ENST00000521700 CTNND1O60716 968 aaKnown RBP21.73■■□□□ 1.07
TRAPPC9-211ENST00000521700 KCNH4Q9UQ05 1017 aa21.73■■□□□ 1.07
TRAPPC9-211ENST00000521700 FLT1P17948 1338 aa21.73■■□□□ 1.07
TRAPPC9-211ENST00000521700 FOCADQ5VW36 1801 aa21.72■■□□□ 1.07
TRAPPC9-211ENST00000521700 BTBD19C9JJ37 291 aa21.72■■□□□ 1.07
TRAPPC9-211ENST00000521700 PTPRAP18433 802 aa21.72■■□□□ 1.07
TRAPPC9-211ENST00000521700 SLC9C2Q5TAH2 1124 aa21.72■■□□□ 1.07
TRAPPC9-211ENST00000521700 DHX36Q9H2U1 1008 aaKnown RBP21.72■■□□□ 1.07
TRAPPC9-211ENST00000521700 PICK1Q9NRD5 415 aa21.72■■□□□ 1.07
TRAPPC9-211ENST00000521700 PI4KBQ9UBF8 816 aa21.72■■□□□ 1.07
TRAPPC9-211ENST00000521700 PDE6AP16499 860 aa21.71■■□□□ 1.07
TRAPPC9-211ENST00000521700 TAF1CQ15572 869 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC9-211ENST00000521700 HAUS7Q99871 368 aa21.71■■□□□ 1.07
TRAPPC9-211ENST00000521700 PAG1Q9NWQ8 432 aa21.71■■□□□ 1.07
TRAPPC9-211ENST00000521700 PALD1Q9ULE6 856 aa21.71■■□□□ 1.07
TRAPPC9-211ENST00000521700 ZHX2Q9Y6X8 837 aa21.71■■□□□ 1.07
TRAPPC9-211ENST00000521700 CXCL11O14625 94 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms