RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 OSBPL5Q9H0X9 879 aaPredicted RBP11.48□□□□□ -0.57
CLK4-209ENST00000521621 EHD4Q9H223 541 aa11.48□□□□□ -0.57
CLK4-209ENST00000521621 RGS3P49796 1198 aa11.48□□□□□ -0.57
CLK4-209ENST00000521621 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
CLK4-209ENST00000521621 HERC5Q9UII4 1024 aaKnown RBP11.48□□□□□ -0.57
CLK4-209ENST00000521621 MYH1P12882 1939 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 PDE6AP16499 860 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 ZNF157P51786 506 aaPredicted RBP11.47□□□□□ -0.57
CLK4-209ENST00000521621 NFIAQ12857 509 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 SPRYD7Q5W111 196 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 DLK2Q6UY11 383 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 ZNF408Q9H9D4 720 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 MANSC4A6NHS7 340 aaPredicted RBP11.47□□□□□ -0.57
CLK4-209ENST00000521621 MX1P20591 662 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 CYP4F22Q6NT55 531 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 ADGRA1Q86SQ6 560 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 WNK4Q96J92 1243 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 PRDM10Q9NQV6 1147 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 ANGEL1Q9UNK9 670 aaKnown RBP11.47□□□□□ -0.57
CLK4-209ENST00000521621 ATAD5Q96QE3 1844 aa11.47□□□□□ -0.57
CLK4-209ENST00000521621 SPDYE5A6NIY4 337 aa11.46□□□□□ -0.57
CLK4-209ENST00000521621 PHF20L1A8MW92 1017 aa11.46□□□□□ -0.57
CLK4-209ENST00000521621 SMARCA5O60264 1052 aaPredicted RBP11.46□□□□□ -0.57
CLK4-209ENST00000521621 CYP7A1P22680 504 aa11.46□□□□□ -0.57
CLK4-209ENST00000521621 SREBF2Q12772 1141 aa11.46□□□□□ -0.57
CLK4-209ENST00000521621 GIMAP6Q6P9H5 292 aa11.46□□□□□ -0.57
CLK4-209ENST00000521621 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.46□□□□□ -0.57
CLK4-209ENST00000521621 FOXP4Q8IVH2 680 aaPredicted RBP11.46□□□□□ -0.57
CLK4-209ENST00000521621 DDX4Q9NQI0 724 aaKnown RBP11.46□□□□□ -0.57
CLK4-209ENST00000521621 UBE2Q2LH0YL09 131 aa11.46□□□□□ -0.58
CLK4-209ENST00000521621 TEX11Q8IYF3 940 aa11.46□□□□□ -0.58
CLK4-209ENST00000521621 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.58
CLK4-209ENST00000521621 SH3RF3Q8TEJ3 882 aaPredicted RBP11.46□□□□□ -0.58
CLK4-209ENST00000521621 LOC285556D6RIA3 1793 aa11.46□□□□□ -0.58
CLK4-209ENST00000521621 FLT1P17948 1338 aa11.46□□□□□ -0.58
CLK4-209ENST00000521621 GOLIM4O00461 696 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 PPATQ06203 517 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 PI4KBQ9UBF8 816 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 CTNND1O60716 968 aaKnown RBP11.45□□□□□ -0.58
CLK4-209ENST00000521621 IDH1O75874 414 aaKnown RBP11.45□□□□□ -0.58
CLK4-209ENST00000521621 ALDH1A1P00352 501 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 IGHDP01880 384 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 PPIL2Q13356 520 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 SLC9C2Q5TAH2 1124 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 ERICH6BQ5W0A0 696 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 CHD1LQ86WJ1 897 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 SLC10A4Q96EP9 437 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
CLK4-209ENST00000521621 KCNH4Q9UQ05 1017 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 MAGEB6P1A0A0J9YX57 407 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 PDE1AP54750 535 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 PRAMEF18Q5VWM3 479 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 SNCAIPQ9Y6H5 919 aa11.45□□□□□ -0.58
CLK4-209ENST00000521621 ZNF532Q9HCE3 1301 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 CTCFP49711 727 aaPredicted RBP11.44□□□□□ -0.58
CLK4-209ENST00000521621 CACNB3P54284 484 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
CLK4-209ENST00000521621 ANKRD45Q5TZF3 282 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
CLK4-209ENST00000521621 AATFQ9NY61 560 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLK4-209ENST00000521621 CSADQ9Y600 493 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 VGLL4Q14135 290 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 TTLL12Q14166 644 aaPredicted RBP11.44□□□□□ -0.58
CLK4-209ENST00000521621 ZFPM1Q8IX07 1006 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 EVI5LQ96CN4 794 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 CSRNP1Q96S65 589 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
CLK4-209ENST00000521621 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
CLK4-209ENST00000521621 APBB1O00213 710 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 RNF113AO15541 343 aaKnown RBP11.43□□□□□ -0.58
CLK4-209ENST00000521621 HSPA1AP0DMV8 641 aaKnown RBP11.43□□□□□ -0.58
CLK4-209ENST00000521621 HSPA1BP0DMV9 641 aaKnown RBP11.43□□□□□ -0.58
CLK4-209ENST00000521621 GNAT2P19087 354 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 SCYL3Q8IZE3 742 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 APPBP2Q92624 585 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 AIDAQ96BJ3 306 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 DNAJC2Q99543 621 aaKnown RBP11.43□□□□□ -0.58
CLK4-209ENST00000521621 CXCL11O14625 94 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 GTF2A2P52657 109 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 MOB2Q70IA6 237 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 ROBO3Q96MS0 1386 aa11.43□□□□□ -0.58
CLK4-209ENST00000521621 AOC2O75106 756 aa11.42□□□□□ -0.58
CLK4-209ENST00000521621 SBK1Q52WX2 424 aa11.42□□□□□ -0.58
CLK4-209ENST00000521621 TTC6Q86TZ1 520 aa11.42□□□□□ -0.58
CLK4-209ENST00000521621 PTPRFP10586 1907 aa11.42□□□□□ -0.58
CLK4-209ENST00000521621 GREB1LQ9C091 1923 aaPredicted RBP11.42□□□□□ -0.58
CLK4-209ENST00000521621 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
CLK4-209ENST00000521621 SCAF8Q9UPN6 1271 aaKnown RBP11.42□□□□□ -0.58
CLK4-209ENST00000521621 ZMYM6O95789 1325 aa11.42□□□□□ -0.58
CLK4-209ENST00000521621 HLA-DOAP06340 250 aa11.41□□□□□ -0.58
CLK4-209ENST00000521621 HSPA8P11142 646 aaKnown RBP11.41□□□□□ -0.58
CLK4-209ENST00000521621 GJA5P36382 358 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms