RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 RGPD3A6NKT7 1758 aaPredicted RBP8.59□□□□□ -1.03
RUNX1T1-234ENST00000521553 RGPD4Q7Z3J3 1758 aa8.59□□□□□ -1.03
RUNX1T1-234ENST00000521553 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
RUNX1T1-234ENST00000521553 ITGB4P16144 1822 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 U2SURPO15042 1029 aaKnown RBP8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 ZBTB7BO15156 539 aaPredicted RBP8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 PPP2R1AP30153 589 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 KCNQ4P56696 695 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 TMEM132AQ24JP5 1023 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 CCDC102BQ68D86 513 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 SULT6B1Q6IMI4 303 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 C20orf204Q6ZNR8 217 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 KAT6BQ8WYB5 2073 aa8.58□□□□□ -1.04
RUNX1T1-234ENST00000521553 PARD3Q8TEW0 1356 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 LILRB5O75023 590 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 HMOX1P09601 288 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 SELPP16109 830 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 IL13P35225 146 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 ATP1A2P50993 1020 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 HSH2DQ96JZ2 352 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 PCMTD2Q9NV79 361 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 BCL9O00512 1426 aa8.57□□□□□ -1.04
RUNX1T1-234ENST00000521553 RAC1P63000 192 aa8.56□□□□□ -1.04
RUNX1T1-234ENST00000521553 EZH2Q15910 746 aaKnown RBP8.56□□□□□ -1.04
RUNX1T1-234ENST00000521553 LENG1Q96BZ8 264 aaPredicted RBP8.56□□□□□ -1.04
RUNX1T1-234ENST00000521553 PHACTR1Q9C0D0 580 aa8.56□□□□□ -1.04
RUNX1T1-234ENST00000521553 TSPAN10Q9H1Z9 355 aaPredicted RBP8.56□□□□□ -1.04
RUNX1T1-234ENST00000521553 HIRAP54198 1017 aaPredicted RBP8.55□□□□□ -1.04
RUNX1T1-234ENST00000521553 PLEKHO1Q53GL0 409 aaPredicted RBP8.55□□□□□ -1.04
RUNX1T1-234ENST00000521553 ZNF280CQ8ND82 737 aa8.55□□□□□ -1.04
RUNX1T1-234ENST00000521553 BHMTQ93088 406 aa8.55□□□□□ -1.04
RUNX1T1-234ENST00000521553 SUSD3Q96L08 255 aa8.55□□□□□ -1.04
RUNX1T1-234ENST00000521553 KCNQ2O43526 872 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 IRAK1P51617 712 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 TYRO3Q06418 890 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 RALBP1Q15311 655 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 C1orf141Q5JVX7 400 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 ZNF530Q6P9A1 599 aaPredicted RBP8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 PTF1AQ7RTS3 328 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 KIAA1024Q9UPX6 916 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 NUDCQ9Y266 331 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 SCN11AQ9UI33 1791 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 LY75O60449 1722 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 KDRP35968 1356 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 MYBBP1AQ9BQG0 1328 aaKnown RBP8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 CYP27B1O15528 508 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 CLDN10P78369 228 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 FZD5Q13467 585 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 IGFLR1Q9H665 355 aa8.54□□□□□ -1.04
RUNX1T1-234ENST00000521553 PLEKHG2Q9H7P9 1386 aa8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 M0R2N6 131 aa8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 PHKG2P15735 406 aa8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 TBC1D8BQ0IIM8 1120 aa8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 MPRIPQ6WCQ1 1025 aa8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 UBE2OQ9C0C9 1292 aaKnown RBP8.53□□□□□ -1.04
RUNX1T1-234ENST00000521553 C5P01031 1676 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 PALM3A6NDB9 673 aaPredicted RBP8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 HSP90AB1P08238 724 aaKnown RBP8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 OGFOD1Q8N543 542 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 CAMKK2Q96RR4 588 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 SSBP4Q9BWG4 385 aaPredicted RBP8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.05
RUNX1T1-234ENST00000521553 PLSCR1O15162 318 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 RAD21O60216 631 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 PPP1R12BO60237 982 aaPredicted RBP8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 NEFMP07197 916 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 PRKAR2BP31323 418 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 SHISA2Q6UWI4 295 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 BTLAQ7Z6A9 289 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 ALDH16A1Q8IZ83 802 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 NUDT8Q8WV74 236 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 POM121Q96HA1 1249 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 TMOD3Q9NYL9 352 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 SLC6A14Q9UN76 642 aa8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
RUNX1T1-234ENST00000521553 DLG5Q8TDM6 1919 aa8.5□□□□□ -1.05
RUNX1T1-234ENST00000521553 TAF1LQ8IZX4 1826 aa8.5□□□□□ -1.05
RUNX1T1-234ENST00000521553 ANP32CO43423 234 aa8.5□□□□□ -1.05
RUNX1T1-234ENST00000521553 HIF1AQ16665 826 aa8.5□□□□□ -1.05
RUNX1T1-234ENST00000521553 TXNRD1Q16881 649 aa8.5□□□□□ -1.05
RUNX1T1-234ENST00000521553 AKAP4Q5JQC9 854 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms