RNA–Protein interactions for RNA: ENST00000521477.5

DENND3-216, Transcript of DENN domain containing 3, humanhuman

TSL 3

Gene DENND3, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-216ENST00000521477 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.12
DENND3-216ENST00000521477 RIOK1Q9BRS2 568 aaKnown RBP14.33□□□□□ -0.12
DENND3-216ENST00000521477 ZNF341Q9BYN7 854 aa14.33□□□□□ -0.12
DENND3-216ENST00000521477 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
DENND3-216ENST00000521477 CDK5RAP2Q96SN8 1893 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 HIP1O00291 1037 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 RNF113AO15541 343 aaKnown RBP14.32□□□□□ -0.12
DENND3-216ENST00000521477 GNAT2P19087 354 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 CACNB3P54284 484 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 FMR1Q06787 632 aaKnown RBP eCLIP14.32□□□□□ -0.12
DENND3-216ENST00000521477 ADGRA1Q86SQ6 560 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 PLEKHM2Q8IWE5 1019 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 OTUD7AQ8TE49 926 aaPredicted RBP14.32□□□□□ -0.12
DENND3-216ENST00000521477 SH3RF3Q8TEJ3 882 aaPredicted RBP14.32□□□□□ -0.12
DENND3-216ENST00000521477 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 CSRNP1Q96S65 589 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 FSD1Q9BTV5 496 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 ATP8A2Q9NTI2 1148 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 HERC5Q9UII4 1024 aaKnown RBP14.32□□□□□ -0.12
DENND3-216ENST00000521477 ANGEL1Q9UNK9 670 aaKnown RBP14.32□□□□□ -0.12
DENND3-216ENST00000521477 FLT1P17948 1338 aa14.32□□□□□ -0.12
DENND3-216ENST00000521477 HLA-DOAP06340 250 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 SLC10A3P09131 477 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 ZBTB48P10074 688 aaPredicted RBP14.31□□□□□ -0.12
DENND3-216ENST00000521477 USP5P45974 858 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 TCP10Q12799 353 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 ZSCAN29Q8IWY8 852 aaPredicted RBP14.31□□□□□ -0.12
DENND3-216ENST00000521477 EDC3Q96F86 508 aaKnown RBP14.31□□□□□ -0.12
DENND3-216ENST00000521477 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 CAPNS2Q96L46 248 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 DDX4Q9NQI0 724 aaKnown RBP14.31□□□□□ -0.12
DENND3-216ENST00000521477 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 PI4KBQ9UBF8 816 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 CSADQ9Y600 493 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 LAMB1P07942 1786 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 CEP350Q5VT06 3117 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
DENND3-216ENST00000521477 USP2O75604 605 aaPredicted RBP14.3□□□□□ -0.12
DENND3-216ENST00000521477 ZNF157P51786 506 aaPredicted RBP14.3□□□□□ -0.12
DENND3-216ENST00000521477 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 PICALMQ13492 652 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
DENND3-216ENST00000521477 PRAMEF18Q5VWM3 479 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 TSHZ3Q63HK5 1081 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 TTC6Q86TZ1 520 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
DENND3-216ENST00000521477 FOXP4Q8IVH2 680 aaPredicted RBP14.3□□□□□ -0.12
DENND3-216ENST00000521477 AMOTL1Q8IY63 956 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 MIGA1Q8NAN2 632 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.3□□□□□ -0.12
DENND3-216ENST00000521477 TBC1D2Q9BYX2 928 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 EHD4Q9H223 541 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 ZNF112Q9UJU3 913 aa14.3□□□□□ -0.12
DENND3-216ENST00000521477 WDR33Q9C0J8 1336 aaKnown RBP14.3□□□□□ -0.12
DENND3-216ENST00000521477 DDX60LQ5H9U9 1706 aaKnown RBP14.29□□□□□ -0.12
DENND3-216ENST00000521477 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
DENND3-216ENST00000521477 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
DENND3-216ENST00000521477 MAP2K1Q02750 393 aaPredicted RBP14.29□□□□□ -0.12
DENND3-216ENST00000521477 TGFBRAP1Q8WUH2 860 aa14.29□□□□□ -0.12
DENND3-216ENST00000521477 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
DENND3-216ENST00000521477 SCAF8Q9UPN6 1271 aaKnown RBP14.29□□□□□ -0.12
DENND3-216ENST00000521477 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
DENND3-216ENST00000521477 CA12O43570 354 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 MBD4O95243 580 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 MYH1P12882 1939 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 VEGFBP49765 207 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 DYNLL1P63167 89 aaKnown RBP14.28□□□□□ -0.12
DENND3-216ENST00000521477 ZMYM1Q5SVZ6 1142 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 DLK2Q6UY11 383 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
DENND3-216ENST00000521477 RASAL3Q86YV0 1011 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 SLC10A4Q96EP9 437 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 WRNIP1Q96S55 665 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 TRIM34Q9BYJ4 488 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 HELLSQ9NRZ9 838 aa14.28□□□□□ -0.12
DENND3-216ENST00000521477 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.13
DENND3-216ENST00000521477 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
DENND3-216ENST00000521477 UBE2Q2LH0YL09 131 aa14.27□□□□□ -0.13
DENND3-216ENST00000521477 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.13
DENND3-216ENST00000521477 INHBEP58166 350 aa14.27□□□□□ -0.13
DENND3-216ENST00000521477 TTC22Q5TAA0 569 aa14.27□□□□□ -0.13
DENND3-216ENST00000521477 MAPKAPK5Q8IW41 473 aa14.27□□□□□ -0.13
DENND3-216ENST00000521477 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
DENND3-216ENST00000521477 FAM155AB1AL88 458 aaPredicted RBP14.26□□□□□ -0.13
DENND3-216ENST00000521477 HTRA3P83110 453 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 SREBF2Q12772 1141 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 CYP4F22Q6NT55 531 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 SH3BP5LQ7L8J4 393 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 ERO1BQ86YB8 467 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 LCORLQ8N3X6 602 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 STRBPQ96SI9 672 aaKnown RBP14.26□□□□□ -0.13
DENND3-216ENST00000521477 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 PUS7LQ9H0K6 701 aaKnown RBP14.26□□□□□ -0.13
DENND3-216ENST00000521477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.26□□□□□ -0.13
DENND3-216ENST00000521477 DCP1AQ9NPI6 582 aaPredicted RBP14.26□□□□□ -0.13
DENND3-216ENST00000521477 ARPP21Q9UBL0 812 aaPredicted RBP14.26□□□□□ -0.13
DENND3-216ENST00000521477 SWAP70Q9UH65 585 aa14.26□□□□□ -0.13
DENND3-216ENST00000521477 DOCK1Q14185 1865 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms