RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 SURF6O75683 361 aaKnown RBP13.2□□□□□ -0.3
PVT1-209ENST00000520913 CETPP11597 493 aa13.2□□□□□ -0.3
PVT1-209ENST00000520913 INPP5BP32019 993 aa13.2□□□□□ -0.3
PVT1-209ENST00000520913 MLLT1Q03111 559 aaPredicted RBP13.2□□□□□ -0.3
PVT1-209ENST00000520913 PPATQ06203 517 aa13.2□□□□□ -0.3
PVT1-209ENST00000520913 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
PVT1-209ENST00000520913 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
PVT1-209ENST00000520913 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
PVT1-209ENST00000520913 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
PVT1-209ENST00000520913 MIGA2Q7L4E1 593 aa13.2□□□□□ -0.3
PVT1-209ENST00000520913 ZCCHC17Q9NP64 241 aaKnown RBP13.2□□□□□ -0.3
PVT1-209ENST00000520913 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
PVT1-209ENST00000520913 IRF6O14896 467 aa13.19□□□□□ -0.3
PVT1-209ENST00000520913 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
PVT1-209ENST00000520913 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
PVT1-209ENST00000520913 LDHCP07864 332 aa13.19□□□□□ -0.3
PVT1-209ENST00000520913 PICALMQ13492 652 aa13.19□□□□□ -0.3
PVT1-209ENST00000520913 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
PVT1-209ENST00000520913 CEP85Q6P2H3 762 aa13.19□□□□□ -0.3
PVT1-209ENST00000520913 ZSCAN29Q8IWY8 852 aaPredicted RBP13.19□□□□□ -0.3
PVT1-209ENST00000520913 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
PVT1-209ENST00000520913 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
PVT1-209ENST00000520913 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
PVT1-209ENST00000520913 NOP58Q9Y2X3 529 aaKnown RBP13.19□□□□□ -0.3
PVT1-209ENST00000520913 GPR75-ASB3A0A0A6YYF3 556 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 SOX10P56693 466 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 SP3Q02447 781 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 OTOP1Q7RTM1 612 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 FAM43AQ8N2R8 423 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 NOL10Q9BSC4 688 aaKnown RBP13.18□□□□□ -0.3
PVT1-209ENST00000520913 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
PVT1-209ENST00000520913 LRP2BPQ9P2M1 347 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 TRIM17Q9Y577 477 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 BRCA2P51587 3418 aa13.18□□□□□ -0.3
PVT1-209ENST00000520913 RHBDL3P58872 404 aa13.17□□□□□ -0.3
PVT1-209ENST00000520913 TBC1D9Q6ZT07 1266 aa13.17□□□□□ -0.3
PVT1-209ENST00000520913 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
PVT1-209ENST00000520913 ZFPM1Q8IX07 1006 aa13.17□□□□□ -0.3
PVT1-209ENST00000520913 ZNF512BQ96KM6 892 aaPredicted RBP13.17□□□□□ -0.3
PVT1-209ENST00000520913 KCNH4Q9UQ05 1017 aa13.17□□□□□ -0.3
PVT1-209ENST00000520913 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
PVT1-209ENST00000520913 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
PVT1-209ENST00000520913 IGSF3O75054 1194 aa13.16□□□□□ -0.3
PVT1-209ENST00000520913 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
PVT1-209ENST00000520913 NAA16Q6N069 864 aaPredicted RBP13.16□□□□□ -0.3
PVT1-209ENST00000520913 SH3BP5LQ7L8J4 393 aa13.16□□□□□ -0.3
PVT1-209ENST00000520913 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
PVT1-209ENST00000520913 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.16□□□□□ -0.3
PVT1-209ENST00000520913 DBNLQ9UJU6 430 aaKnown RBP13.16□□□□□ -0.3
PVT1-209ENST00000520913 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
PVT1-209ENST00000520913 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
PVT1-209ENST00000520913 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
PVT1-209ENST00000520913 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
PVT1-209ENST00000520913 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
PVT1-209ENST00000520913 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
PVT1-209ENST00000520913 PICK1Q9NRD5 415 aa13.15□□□□□ -0.3
PVT1-209ENST00000520913 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
PVT1-209ENST00000520913 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
PVT1-209ENST00000520913 EXOC6BQ9Y2D4 811 aa13.15□□□□□ -0.3
PVT1-209ENST00000520913 PHF20L1A8MW92 1017 aa13.14□□□□□ -0.31
PVT1-209ENST00000520913 TLR2O60603 784 aa13.14□□□□□ -0.31
PVT1-209ENST00000520913 BAG3O95817 575 aa13.14□□□□□ -0.31
PVT1-209ENST00000520913 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
PVT1-209ENST00000520913 PLCG2P16885 1265 aa13.14□□□□□ -0.31
PVT1-209ENST00000520913 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
PVT1-209ENST00000520913 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
PVT1-209ENST00000520913 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
PVT1-209ENST00000520913 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
PVT1-209ENST00000520913 RCAN3Q9UKA8 241 aa13.14□□□□□ -0.31
PVT1-209ENST00000520913 PDE4DIPQ5VU43 2346 aa13.13□□□□□ -0.31
PVT1-209ENST00000520913 CXCL11O14625 94 aa13.13□□□□□ -0.31
PVT1-209ENST00000520913 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
PVT1-209ENST00000520913 HMMRO75330 724 aa13.13□□□□□ -0.31
PVT1-209ENST00000520913 ZAP70P43403 619 aa13.13□□□□□ -0.31
PVT1-209ENST00000520913 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
PVT1-209ENST00000520913 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
PVT1-209ENST00000520913 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
PVT1-209ENST00000520913 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
PVT1-209ENST00000520913 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
PVT1-209ENST00000520913 PDHXO00330 501 aa13.12□□□□□ -0.31
PVT1-209ENST00000520913 TBC1D12O60347 775 aa13.12□□□□□ -0.31
PVT1-209ENST00000520913 PTPRAP18433 802 aa13.12□□□□□ -0.31
PVT1-209ENST00000520913 KIF22Q14807 665 aa13.12□□□□□ -0.31
PVT1-209ENST00000520913 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
PVT1-209ENST00000520913 AACSQ86V21 672 aa13.12□□□□□ -0.31
PVT1-209ENST00000520913 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
PVT1-209ENST00000520913 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
PVT1-209ENST00000520913 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
PVT1-209ENST00000520913 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.12□□□□□ -0.312e-9■■■■□ 26.3
PVT1-209ENST00000520913 MKI67P46013 3256 aaKnown RBP13.12□□□□□ -0.31
PVT1-209ENST00000520913 FLT1P17948 1338 aa13.12□□□□□ -0.31
PVT1-209ENST00000520913 ADGRA2Q96PE1 1338 aa13.12□□□□□ -0.31
PVT1-209ENST00000520913 FAM196BA6NMK8 535 aa13.11□□□□□ -0.31
PVT1-209ENST00000520913 LACTBP83111 547 aaPredicted RBP13.11□□□□□ -0.31
PVT1-209ENST00000520913 CAP1Q01518 475 aa13.11□□□□□ -0.31
PVT1-209ENST00000520913 MOGSQ13724 837 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms