RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
CLK4-206ENST00000520878 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 RCOR1Q9UKL0 485 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 MRVI1Q9Y6F6 885 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 BRAPQ7Z569 592 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 CTAGE5O15320 804 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 NDUFA8P51970 172 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 STX1AQ16623 288 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
CLK4-206ENST00000520878 CLIC6Q96NY7 704 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 CABP5Q9NP86 173 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
CLK4-206ENST00000520878 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
CLK4-206ENST00000520878 ST5P78524 1137 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 MECOMQ03112 1051 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 PDE4BQ07343 736 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 TCHHQ07283 1943 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 AFF2P51816 1311 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 ZNF512BQ96KM6 892 aaPredicted RBP13.12□□□□□ -0.31
CLK4-206ENST00000520878 GJD4Q96KN9 370 aaPredicted RBP13.12□□□□□ -0.31
CLK4-206ENST00000520878 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
CLK4-206ENST00000520878 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
CLK4-206ENST00000520878 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 CYP2D6P10635 497 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 PTGS1P23219 599 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
CLK4-206ENST00000520878 TXNRD3Q86VQ6 643 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 ARFGEF2Q9Y6D5 1785 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 NLRP5P59047 1200 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 NFIXQ14938 502 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
CLK4-206ENST00000520878 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
CLK4-206ENST00000520878 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
CLK4-206ENST00000520878 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 ZNF202O95125 648 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 BAG3O95817 575 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 GUCY1A2P33402 732 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
CLK4-206ENST00000520878 NR5A1Q13285 461 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 PICALMQ13492 652 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 LINC00301Q8NCQ3 95 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 TGFBRAP1Q8WUH2 860 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 NMT2O60551 498 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 ADALQ6DHV7 355 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 ABCC6O95255 1503 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 ZNF804AQ7Z570 1209 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.314e-6■□□□□ 8.1
CLK4-206ENST00000520878 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
CLK4-206ENST00000520878 HSPA1LP34931 641 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 ABCC12Q96J65 1359 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 AGXT2Q9BYV1 514 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 JCADQ9P266 1359 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLK4-206ENST00000520878 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 ZSCAN10Q96SZ4 725 aaPredicted RBP13.09□□□□□ -0.31
CLK4-206ENST00000520878 RTEL1Q9NZ71 1219 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 SERPINB2P05120 415 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 ATL3Q6DD88 541 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
CLK4-206ENST00000520878 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 CCDC34Q96HJ3 373 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 PDLIM2Q96JY6 352 aa13.09□□□□□ -0.31
CLK4-206ENST00000520878 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
CLK4-206ENST00000520878 NRDCO43847 1150 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 SERPINC1P01008 464 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
CLK4-206ENST00000520878 TFAP4Q01664 338 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 MSL1Q68DK7 614 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 HOOK1Q9UJC3 728 aaKnown RBP13.08□□□□□ -0.32
CLK4-206ENST00000520878 DEXIO95424 95 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 PFKFB1P16118 471 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 HS1BP3Q53T59 392 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 KLHL10Q6JEL2 608 aa13.08□□□□□ -0.32
CLK4-206ENST00000520878 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms