RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ANKRD33BA6NCL7 494 aa7.96□□□□□ -1.14
SKP1-207ENST00000520417 DCDC2CA8MYV0 355 aa7.96□□□□□ -1.14
SKP1-207ENST00000520417 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.14
SKP1-207ENST00000520417 OGFOD3Q6PK18 319 aa7.96□□□□□ -1.14
SKP1-207ENST00000520417 SEZ6L2Q6UXD5 910 aa7.96□□□□□ -1.14
SKP1-207ENST00000520417 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.96□□□□□ -1.14
SKP1-207ENST00000520417 PCOLCE2Q9UKZ9 415 aa7.96□□□□□ -1.14
SKP1-207ENST00000520417 PPM1HQ9ULR3 514 aa7.96□□□□□ -1.14
SKP1-207ENST00000520417 CELA3AP09093 270 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 BMP6P22004 513 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 EIF4BP23588 611 aaKnown RBP7.95□□□□□ -1.14
SKP1-207ENST00000520417 MSMPQ1L6U9 139 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 ARHGAP27Q6ZUM4 889 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.142e-12■■□□□ 11.8
SKP1-207ENST00000520417 TP53INP2Q8IXH6 220 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 ZC3H7BQ9UGR2 993 aaKnown RBP7.95□□□□□ -1.14
SKP1-207ENST00000520417 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 PCDHGC5Q9Y5F6 944 aa7.95□□□□□ -1.14
SKP1-207ENST00000520417 ZNF252P-AS1Q0IIN9 211 aa7.94□□□□□ -1.14
SKP1-207ENST00000520417 LRRC14Q15048 493 aa7.94□□□□□ -1.14
SKP1-207ENST00000520417 EAPPQ56P03 285 aaPredicted RBP7.94□□□□□ -1.14
SKP1-207ENST00000520417 ZC3H12AQ5D1E8 599 aaKnown RBP7.94□□□□□ -1.14
SKP1-207ENST00000520417 PPM1JQ5JR12 505 aa7.94□□□□□ -1.14
SKP1-207ENST00000520417 C12orf40Q86WS4 652 aa7.94□□□□□ -1.14
SKP1-207ENST00000520417 ISL2Q96A47 359 aa7.94□□□□□ -1.14
SKP1-207ENST00000520417 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
SKP1-207ENST00000520417 CCDC39Q9UFE4 941 aa7.94□□□□□ -1.14
SKP1-207ENST00000520417 NEFMP07197 916 aa7.93□□□□□ -1.14
SKP1-207ENST00000520417 PCNX4Q63HM2 1172 aa7.93□□□□□ -1.14
SKP1-207ENST00000520417 MCTP1Q6DN14 999 aa7.93□□□□□ -1.14
SKP1-207ENST00000520417 FLCNQ8NFG4 579 aa7.93□□□□□ -1.14
SKP1-207ENST00000520417 ELMO3Q96BJ8 720 aa7.93□□□□□ -1.14
SKP1-207ENST00000520417 PRPF40AO75400 957 aaKnown RBP7.92□□□□□ -1.14
SKP1-207ENST00000520417 LMNB1P20700 586 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 GNA15P30679 374 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 ERVK-24P63145 666 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 RASIP1Q5U651 963 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 VSIG10LQ86VR7 867 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 FAM181AQ8N9Y4 354 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 RNF214Q8ND24 703 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 FRMD6Q96NE9 622 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 DUSP9Q99956 384 aaKnown RBP7.92□□□□□ -1.14
SKP1-207ENST00000520417 RNF19AQ9NV58 838 aa7.92□□□□□ -1.14
SKP1-207ENST00000520417 LEFTY1O75610 366 aa7.91□□□□□ -1.14
SKP1-207ENST00000520417 TRIM37O94972 964 aa7.91□□□□□ -1.14
SKP1-207ENST00000520417 CDC37L1Q7L3B6 337 aa7.91□□□□□ -1.14
SKP1-207ENST00000520417 TOP6BLQ8N6T0 577 aa7.91□□□□□ -1.14
SKP1-207ENST00000520417 PRAMEF27A3QJZ7 478 aa7.9□□□□□ -1.14
SKP1-207ENST00000520417 TAL1P17542 331 aaPredicted RBP7.9□□□□□ -1.14
SKP1-207ENST00000520417 FGD1P98174 961 aa7.9□□□□□ -1.14
SKP1-207ENST00000520417 CCDC85BQ15834 202 aaPredicted RBP7.9□□□□□ -1.14
SKP1-207ENST00000520417 MAP3K11Q16584 847 aa7.9□□□□□ -1.14
SKP1-207ENST00000520417 ABI1Q8IZP0 508 aa7.9□□□□□ -1.14
SKP1-207ENST00000520417 CYP8B1Q9UNU6 501 aa7.9□□□□□ -1.14
SKP1-207ENST00000520417 TTBK2Q6IQ55 1244 aa7.89□□□□□ -1.15
SKP1-207ENST00000520417 SV2BQ7L1I2 683 aa7.89□□□□□ -1.15
SKP1-207ENST00000520417 FBXL18Q96ME1 805 aa7.89□□□□□ -1.15
SKP1-207ENST00000520417 DUSP23Q9BVJ7 150 aa7.89□□□□□ -1.15
SKP1-207ENST00000520417 ITIH2P19823 946 aa7.88□□□□□ -1.15
SKP1-207ENST00000520417 PLD6Q8N2A8 252 aaKnown RBP7.88□□□□□ -1.15
SKP1-207ENST00000520417 KRTAP4-8Q9BYQ9 185 aa7.88□□□□□ -1.15
SKP1-207ENST00000520417 AK5Q9Y6K8 562 aa7.88□□□□□ -1.15
SKP1-207ENST00000520417 COL17A1Q9UMD9 1497 aaPredicted RBP7.87□□□□□ -1.15
SKP1-207ENST00000520417 PRNPP04156 253 aa7.87□□□□□ -1.15
SKP1-207ENST00000520417 XPCQ01831 940 aaPredicted RBP7.87□□□□□ -1.15
SKP1-207ENST00000520417 PSMD2Q13200 908 aa7.87□□□□□ -1.15
SKP1-207ENST00000520417 PARP2Q9UGN5 583 aa7.87□□□□□ -1.15
SKP1-207ENST00000520417 SLC5A6Q9Y289 635 aa7.87□□□□□ -1.15
SKP1-207ENST00000520417 PAX4O43316 350 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 PTPN11Q06124 597 aaPredicted RBP7.86□□□□□ -1.15
SKP1-207ENST00000520417 BNIP3Q12983 259 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 INPP5AQ14642 412 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 LRFN4Q6PJG9 635 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 ZNF574Q6ZN55 896 aaPredicted RBP7.86□□□□□ -1.15
SKP1-207ENST00000520417 HDXQ7Z353 690 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 UBE3DQ7Z6J8 389 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 NETO1Q8TDF5 533 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 CACNA2D2Q9NY47 1150 aa7.86□□□□□ -1.15
SKP1-207ENST00000520417 FANCGO15287 622 aa7.85□□□□□ -1.15
SKP1-207ENST00000520417 COL19A1Q14993 1142 aa7.85□□□□□ -1.15
SKP1-207ENST00000520417 ZBTB37Q5TC79 503 aa7.85□□□□□ -1.15
SKP1-207ENST00000520417 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.85□□□□□ -1.15
SKP1-207ENST00000520417 ANKRD24Q8TF21 1146 aa7.85□□□□□ -1.15
SKP1-207ENST00000520417 PLPPR2Q96GM1 343 aa7.85□□□□□ -1.15
SKP1-207ENST00000520417 FAM161BQ96MY7 647 aa7.85□□□□□ -1.15
SKP1-207ENST00000520417 GZF1Q9H116 711 aaPredicted RBP7.85□□□□□ -1.15
SKP1-207ENST00000520417 ETF1P62495 437 aaKnown RBP7.84□□□□□ -1.15
SKP1-207ENST00000520417 SEPT6Q14141 434 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 PLCL1Q15111 1095 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 WIPI1Q5MNZ9 446 aaPredicted RBP7.84□□□□□ -1.15
SKP1-207ENST00000520417 MEI1Q5TIA1 1274 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 AGBL5Q8NDL9 886 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 ZNF507Q8TCN5 953 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 BCL7CQ8WUZ0 217 aaPredicted RBP7.84□□□□□ -1.15
SKP1-207ENST00000520417 PAK6Q9NQU5 681 aaPredicted RBP7.84□□□□□ -1.15
SKP1-207ENST00000520417 PRDM10Q9NQV6 1147 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 ADGRE2Q9UHX3 823 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 PCDHB5Q9Y5E4 795 aa7.84□□□□□ -1.15
SKP1-207ENST00000520417 U3KQE9 123 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms