RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 NDUFB9Q9Y6M9 179 aa22.33■■□□□ 1.17
SREK1-207ENST00000520058 MYH1P12882 1939 aa22.33■■□□□ 1.16
SREK1-207ENST00000520058 WDHD1O75717 1129 aaPredicted RBP22.32■■□□□ 1.16
SREK1-207ENST00000520058 SLC9C2Q5TAH2 1124 aa22.32■■□□□ 1.16
SREK1-207ENST00000520058 ANKRD45Q5TZF3 282 aa22.32■■□□□ 1.16
SREK1-207ENST00000520058 ZSCAN25Q6NSZ9 544 aa22.32■■□□□ 1.16
SREK1-207ENST00000520058 CSRNP1Q96S65 589 aa22.32■■□□□ 1.16
SREK1-207ENST00000520058 TTC41PQ6P2S7 1318 aa22.31■■□□□ 1.16
SREK1-207ENST00000520058 ZBTB48P10074 688 aaPredicted RBP22.31■■□□□ 1.16
SREK1-207ENST00000520058 CTCFP49711 727 aaPredicted RBP22.31■■□□□ 1.16
SREK1-207ENST00000520058 RHBDL3P58872 404 aa22.31■■□□□ 1.16
SREK1-207ENST00000520058 SREBF2Q12772 1141 aa22.31■■□□□ 1.16
SREK1-207ENST00000520058 MIGA2Q7L4E1 593 aa22.3■■□□□ 1.16
SREK1-207ENST00000520058 CDAN1Q8IWY9 1227 aa22.3■■□□□ 1.16
SREK1-207ENST00000520058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.3■■□□□ 1.16
SREK1-207ENST00000520058 SH3RF3Q8TEJ3 882 aaPredicted RBP22.3■■□□□ 1.16
SREK1-207ENST00000520058 WRNIP1Q96S55 665 aa22.3■■□□□ 1.16
SREK1-207ENST00000520058 LAMB1P07942 1786 aa22.3■■□□□ 1.16
SREK1-207ENST00000520058 RFX7Q2KHR2 1363 aa22.29■■□□□ 1.16
SREK1-207ENST00000520058 INHBEP58166 350 aa22.29■■□□□ 1.16
SREK1-207ENST00000520058 LRRFIP1Q32MZ4 808 aaKnown RBP22.29■■□□□ 1.16
SREK1-207ENST00000520058 SPRYD7Q5W111 196 aa22.29■■□□□ 1.16
SREK1-207ENST00000520058 DHX36Q9H2U1 1008 aaKnown RBP22.29■■□□□ 1.16
SREK1-207ENST00000520058 COL2A1P02458 1487 aaPredicted RBP22.28■■□□□ 1.16
SREK1-207ENST00000520058 PCNTO95613 3336 aa22.28■■□□□ 1.16
SREK1-207ENST00000520058 MANSC4A6NHS7 340 aaPredicted RBP22.28■■□□□ 1.16
SREK1-207ENST00000520058 OSBPL5Q9H0X9 879 aaPredicted RBP22.28■■□□□ 1.16
SREK1-207ENST00000520058 ELP3Q9H9T3 547 aa22.28■■□□□ 1.16
SREK1-207ENST00000520058 MAGEB6P1A0A0J9YX57 407 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 PDE6AP16499 860 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 MX1P20591 662 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 USP5P45974 858 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 MKRN3Q13064 507 aaKnown RBP22.27■■□□□ 1.16
SREK1-207ENST00000520058 VGLL4Q14135 290 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 ADGRA1Q86SQ6 560 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 MIGA1Q8NAN2 632 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 TGFBRAP1Q8WUH2 860 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 WNK4Q96J92 1243 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 CLMNQ96JQ2 1002 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 TRIM34Q9BYJ4 488 aa22.27■■□□□ 1.16
SREK1-207ENST00000520058 DDX4Q9NQI0 724 aaKnown RBP22.27■■□□□ 1.16
SREK1-207ENST00000520058 ATRNL1Q5VV63 1379 aa22.26■■□□□ 1.15
SREK1-207ENST00000520058 GLRX3O76003 335 aaKnown RBP22.26■■□□□ 1.15
SREK1-207ENST00000520058 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.26■■□□□ 1.15
SREK1-207ENST00000520058 ZFPM1Q8IX07 1006 aa22.26■■□□□ 1.15
SREK1-207ENST00000520058 SAGE1Q9NXZ1 904 aa22.26■■□□□ 1.15
SREK1-207ENST00000520058 ZNF532Q9HCE3 1301 aa22.26■■□□□ 1.15
SREK1-207ENST00000520058 FOXN1O15353 648 aa22.25■■□□□ 1.15
SREK1-207ENST00000520058 OTUD7BQ6GQQ9 843 aa22.25■■□□□ 1.15
SREK1-207ENST00000520058 OPTNQ96CV9 577 aa22.25■■□□□ 1.15
SREK1-207ENST00000520058 ZIC5Q96T25 663 aa22.25■■□□□ 1.15
SREK1-207ENST00000520058 PI4KBQ9UBF8 816 aa22.25■■□□□ 1.15
SREK1-207ENST00000520058 DDTLA6NHG4 134 aaPredicted RBP22.24■■□□□ 1.15
SREK1-207ENST00000520058 ALDH1A1P00352 501 aa22.24■■□□□ 1.15
SREK1-207ENST00000520058 HLA-DOAP06340 250 aa22.24■■□□□ 1.15
SREK1-207ENST00000520058 IRX6P78412 446 aaPredicted RBP22.24■■□□□ 1.15
SREK1-207ENST00000520058 ERO1BQ86YB8 467 aa22.24■■□□□ 1.15
SREK1-207ENST00000520058 SMC5Q8IY18 1101 aa22.24■■□□□ 1.15
SREK1-207ENST00000520058 CRNKL1Q9BZJ0 848 aaKnown RBP22.24■■□□□ 1.15
SREK1-207ENST00000520058 ATAD5Q96QE3 1844 aa22.24■■□□□ 1.15
SREK1-207ENST00000520058 DOCK1Q14185 1865 aa22.24■■□□□ 1.15
SREK1-207ENST00000520058 NAV1Q8NEY1 1877 aa22.24■■□□□ 1.15
SREK1-207ENST00000520058 TBC1D12O60347 775 aa22.23■■□□□ 1.15
SREK1-207ENST00000520058 TM4SF4P48230 202 aa22.23■■□□□ 1.15
SREK1-207ENST00000520058 DYNLL1P63167 89 aaKnown RBP22.23■■□□□ 1.15
SREK1-207ENST00000520058 UBE3CQ15386 1083 aa22.23■■□□□ 1.15
SREK1-207ENST00000520058 MAPKAPK5Q8IW41 473 aa22.23■■□□□ 1.15
SREK1-207ENST00000520058 ZKSCAN4Q969J2 545 aaPredicted RBP22.23■■□□□ 1.15
SREK1-207ENST00000520058 EDC3Q96F86 508 aaKnown RBP22.23■■□□□ 1.15
SREK1-207ENST00000520058 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.23■■□□□ 1.15
SREK1-207ENST00000520058 PICK1Q9NRD5 415 aa22.23■■□□□ 1.15
SREK1-207ENST00000520058 HERC5Q9UII4 1024 aaKnown RBP22.23■■□□□ 1.15
SREK1-207ENST00000520058 ZNF112Q9UJU3 913 aa22.23■■□□□ 1.15
SREK1-207ENST00000520058 FLT1P17948 1338 aa22.23■■□□□ 1.15
SREK1-207ENST00000520058 ZFYP08048 801 aaPredicted RBP22.22■■□□□ 1.15
SREK1-207ENST00000520058 ADD2P35612 726 aa22.22■■□□□ 1.15
SREK1-207ENST00000520058 GTF2A2P52657 109 aa22.22■■□□□ 1.15
SREK1-207ENST00000520058 B4GALNT3Q6L9W6 998 aa22.22■■□□□ 1.15
SREK1-207ENST00000520058 SH3BP5LQ7L8J4 393 aa22.22■■□□□ 1.15
SREK1-207ENST00000520058 CRACR2BQ8N4Y2 399 aaPredicted RBP22.22■■□□□ 1.15
SREK1-207ENST00000520058 OTUD5Q96G74 571 aa22.22■■□□□ 1.15
SREK1-207ENST00000520058 DDRGK1Q96HY6 314 aa22.22■■□□□ 1.15
SREK1-207ENST00000520058 PRDM10Q9NQV6 1147 aa22.22■■□□□ 1.15
SREK1-207ENST00000520058 MYH8P13535 1937 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 SPDYE5A6NIY4 337 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 CTNND1O60716 968 aaKnown RBP22.21■■□□□ 1.15
SREK1-207ENST00000520058 TRPA1O75762 1119 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 LBX1P52954 281 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 MAP3K10Q02779 954 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 PPATQ06203 517 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 FOXP4Q8IVH2 680 aaPredicted RBP22.21■■□□□ 1.15
SREK1-207ENST00000520058 KBTBD3Q8NAB2 608 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 RNF186Q9NXI6 227 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 SNCAIPQ9Y6H5 919 aa22.21■■□□□ 1.15
SREK1-207ENST00000520058 INPP5BP32019 993 aa22.2■■□□□ 1.14
SREK1-207ENST00000520058 NOL9Q5SY16 702 aaKnown RBP22.2■■□□□ 1.14
SREK1-207ENST00000520058 TSHZ3Q63HK5 1081 aa22.2■■□□□ 1.14
SREK1-207ENST00000520058 TTC6Q86TZ1 520 aa22.2■■□□□ 1.14
SREK1-207ENST00000520058 TCRBV5S4A2TA0A5A2 114 aa22.19■■□□□ 1.14
SREK1-207ENST00000520058 HSPA8P11142 646 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms