RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 MCM5P33992 734 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 USP5P45974 858 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 MMP14P50281 582 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 SCNN1DP51172 638 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 RASSF7Q02833 373 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 CUL4AQ13619 759 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 CTR9Q6PD62 1173 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 TMX3Q96JJ7 454 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 LIMCH1Q9UPQ0 1083 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 NEDD4P46934 1319 aa17.68■□□□□ 0.42
PABPC1-210ENST00000519363 RAD17O75943 681 aa17.67■□□□□ 0.42
PABPC1-210ENST00000519363 FGRP09769 529 aa17.67■□□□□ 0.42
PABPC1-210ENST00000519363 CXCL9Q07325 125 aa17.67■□□□□ 0.42
PABPC1-210ENST00000519363 CIAPIN1Q6FI81 312 aa17.67■□□□□ 0.42
PABPC1-210ENST00000519363 APOBEC3HQ6NTF7 200 aaKnown RBP17.67■□□□□ 0.42
PABPC1-210ENST00000519363 MFSD6Q6ZSS7 791 aa17.67■□□□□ 0.42
PABPC1-210ENST00000519363 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
PABPC1-210ENST00000519363 KRT23Q9C075 422 aa17.67■□□□□ 0.42
PABPC1-210ENST00000519363 SH2B1Q9NRF2 756 aaPredicted RBP17.67■□□□□ 0.42
PABPC1-210ENST00000519363 FLT1P17948 1338 aa17.67■□□□□ 0.42
PABPC1-210ENST00000519363 MYH8P13535 1937 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 USP17L12C9JPN9 530 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 USP17L21D6R901 530 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
PABPC1-210ENST00000519363 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 TOB2Q14106 344 aaPredicted RBP17.66■□□□□ 0.42
PABPC1-210ENST00000519363 TNIP1Q15025 636 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 AMOTL1Q8IY63 956 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 TGFBRAP1Q8WUH2 860 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 MTA3Q9BTC8 594 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
PABPC1-210ENST00000519363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
PABPC1-210ENST00000519363 COL2A1P02458 1487 aaPredicted RBP17.66■□□□□ 0.42
PABPC1-210ENST00000519363 MINDY4BA8MYZ0 360 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 FZD9O00144 591 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 ORC4O43929 436 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 SLC3A2P08195 630 aaKnown RBP17.65■□□□□ 0.42
PABPC1-210ENST00000519363 RPS12P25398 132 aaKnown RBP17.65■□□□□ 0.42
PABPC1-210ENST00000519363 PRELPP51888 382 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 ANTXR2P58335 489 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 CDC42EP5Q6NZY7 148 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 Q6ZUG5 572 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 INTS4Q96HW7 963 aaKnown RBP17.65■□□□□ 0.42
PABPC1-210ENST00000519363 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 TACC3Q9Y6A5 838 aa17.65■□□□□ 0.42
PABPC1-210ENST00000519363 PRC1O43663 620 aa17.64■□□□□ 0.41
PABPC1-210ENST00000519363 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.41
PABPC1-210ENST00000519363 LMNB1P20700 586 aa17.64■□□□□ 0.41
PABPC1-210ENST00000519363 MAPKAPK5Q8IW41 473 aa17.64■□□□□ 0.41
PABPC1-210ENST00000519363 MTMR14Q8NCE2 650 aa17.64■□□□□ 0.41
PABPC1-210ENST00000519363 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
PABPC1-210ENST00000519363 USP40Q9NVE5 1235 aa17.64■□□□□ 0.41
PABPC1-210ENST00000519363 SIPA1L1O43166 1804 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 CYP2D7A0A087X1C5 515 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 B4E1Z4 1266 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
PABPC1-210ENST00000519363 USP17L8P0C7I0 530 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 EVCP57679 992 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 OGFOD1Q8N543 542 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 TMEM87BQ96K49 555 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
PABPC1-210ENST00000519363 CYP2D6P10635 497 aa17.62■□□□□ 0.41
PABPC1-210ENST00000519363 DDIT3P35638 169 aa17.62■□□□□ 0.41
PABPC1-210ENST00000519363 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
PABPC1-210ENST00000519363 PDE4BQ07343 736 aa17.62■□□□□ 0.41
PABPC1-210ENST00000519363 CFAP100Q494V2 611 aa17.62■□□□□ 0.41
PABPC1-210ENST00000519363 NOL8Q76FK4 1167 aaKnown RBP17.62■□□□□ 0.41
PABPC1-210ENST00000519363 ESR2Q92731 530 aa17.62■□□□□ 0.41
PABPC1-210ENST00000519363 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
PABPC1-210ENST00000519363 TPCN1Q9ULQ1 816 aa17.62■□□□□ 0.41
PABPC1-210ENST00000519363 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
PABPC1-210ENST00000519363 SH2B2O14492 632 aaPredicted RBP17.61■□□□□ 0.41
PABPC1-210ENST00000519363 KDM4AO75164 1064 aa17.61■□□□□ 0.41
PABPC1-210ENST00000519363 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
PABPC1-210ENST00000519363 RBM5P52756 815 aaKnown RBP eCLIP17.61■□□□□ 0.41
PABPC1-210ENST00000519363 FGD1P98174 961 aa17.61■□□□□ 0.41
PABPC1-210ENST00000519363 ARHGAP27Q6ZUM4 889 aa17.61■□□□□ 0.41
PABPC1-210ENST00000519363 CYB5R4Q7L1T6 521 aa17.61■□□□□ 0.41
PABPC1-210ENST00000519363 BRF1Q92994 677 aa17.61■□□□□ 0.41
PABPC1-210ENST00000519363 OSBPL5Q9H0X9 879 aaPredicted RBP17.61■□□□□ 0.41
PABPC1-210ENST00000519363 CIZ1Q9ULV3 898 aaPredicted RBP17.61■□□□□ 0.41
PABPC1-210ENST00000519363 ANGEL1Q9UNK9 670 aaKnown RBP17.61■□□□□ 0.41
PABPC1-210ENST00000519363 LARGE1O95461 756 aa17.6■□□□□ 0.41
PABPC1-210ENST00000519363 POLR3DP05423 398 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-210ENST00000519363 ZNF280AP59817 542 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-210ENST00000519363 ME3Q16798 604 aa17.6■□□□□ 0.41
PABPC1-210ENST00000519363 DPF2Q92785 391 aa17.6■□□□□ 0.41
PABPC1-210ENST00000519363 ZBED3Q96IU2 234 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-210ENST00000519363 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
PABPC1-210ENST00000519363 ZNF287Q9HBT7 754 aa17.6■□□□□ 0.41
PABPC1-210ENST00000519363 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
PABPC1-210ENST00000519363 ZBTB12Q9Y330 459 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-210ENST00000519363 ATRNL1Q5VV63 1379 aa17.59■□□□□ 0.41
PABPC1-210ENST00000519363 SMIM22K7EJ46 135 aa17.59■□□□□ 0.41
PABPC1-210ENST00000519363 YBX3P16989 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
PABPC1-210ENST00000519363 LIFRP42702 1097 aa17.59■□□□□ 0.41
PABPC1-210ENST00000519363 SART3Q15020 963 aaKnown RBP17.59■□□□□ 0.41
PABPC1-210ENST00000519363 DLGAP5Q15398 846 aa17.59■□□□□ 0.41
PABPC1-210ENST00000519363 C16orf86Q6ZW13 317 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms