RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 SEPT3Q9UH03 358 aa8.51□□□□□ -1.05
UBLCP1-202ENST00000519276 FOXD3Q9UJU5 478 aaPredicted RBP8.51□□□□□ -1.05
UBLCP1-202ENST00000519276 SPRED3Q2MJR0 410 aa8.5□□□□□ -1.05
UBLCP1-202ENST00000519276 DBX2Q6ZNG2 339 aa8.5□□□□□ -1.05
UBLCP1-202ENST00000519276 CYFIP1Q7L576 1253 aa8.5□□□□□ -1.05
UBLCP1-202ENST00000519276 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
UBLCP1-202ENST00000519276 SLFN14P0C7P3 912 aa8.49□□□□□ -1.05
UBLCP1-202ENST00000519276 GRIA4P48058 902 aa8.49□□□□□ -1.05
UBLCP1-202ENST00000519276 ID3Q02535 119 aa8.49□□□□□ -1.05
UBLCP1-202ENST00000519276 AP3B2Q13367 1082 aa8.49□□□□□ -1.05
UBLCP1-202ENST00000519276 PCOLCE2Q9UKZ9 415 aa8.49□□□□□ -1.05
UBLCP1-202ENST00000519276 MED14OSP0DP75 135 aa8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 TCF12Q99081 682 aa8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 NSUN3Q9H649 340 aaKnown RBP8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 SERPINA10Q9UK55 444 aa8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 POLIQ9UNA4 740 aa8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 LIN7BQ9HAP6 207 aa8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 ZFYVE28Q9HCC9 887 aa8.48□□□□□ -1.05
UBLCP1-202ENST00000519276 ATG14Q6ZNE5 492 aa8.47□□□□□ -1.05
UBLCP1-202ENST00000519276 DIRC2Q96SL1 478 aa8.47□□□□□ -1.05
UBLCP1-202ENST00000519276 DISC1Q9NRI5 854 aa8.47□□□□□ -1.05
UBLCP1-202ENST00000519276 TCAF2A6NFQ2 919 aa8.46□□□□□ -1.06
UBLCP1-202ENST00000519276 USP5P45974 858 aa8.46□□□□□ -1.06
UBLCP1-202ENST00000519276 A0A1W2PP55 124 aa8.45□□□□□ -1.06
UBLCP1-202ENST00000519276 IGF2BP3O00425 579 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBLCP1-202ENST00000519276 RNGTTO60942 597 aaKnown RBP8.45□□□□□ -1.06
UBLCP1-202ENST00000519276 LIG1P18858 919 aa8.45□□□□□ -1.06
UBLCP1-202ENST00000519276 TOP6BLQ8N6T0 577 aa8.45□□□□□ -1.06
UBLCP1-202ENST00000519276 HEXIM2Q96MH2 286 aaKnown RBP8.45□□□□□ -1.06
UBLCP1-202ENST00000519276 GTF2IRD1Q9UHL9 959 aa8.45□□□□□ -1.06
UBLCP1-202ENST00000519276 HNRNPUQ00839 825 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 TTLL4Q14679 1199 aa8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 SPACA3Q8IXA5 215 aa8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 CCDC97Q96F63 343 aaPredicted RBP8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 WDR89Q96FK6 387 aaPredicted RBP8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 ZNF576Q9H609 170 aa8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 GLDCP23378 1020 aa8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 MPSTP25325 297 aa8.44□□□□□ -1.06
UBLCP1-202ENST00000519276 GDNFP39905 211 aa8.43□□□□□ -1.06
UBLCP1-202ENST00000519276 KIF4BQ2VIQ3 1234 aa8.43□□□□□ -1.06
UBLCP1-202ENST00000519276 FAM214BQ7L5A3 538 aa8.43□□□□□ -1.06
UBLCP1-202ENST00000519276 GALNT12Q8IXK2 581 aa8.43□□□□□ -1.06
UBLCP1-202ENST00000519276 CCDC82Q8N4S0 544 aa8.43□□□□□ -1.06
UBLCP1-202ENST00000519276 CCDC86Q9H6F5 360 aaKnown RBP8.43□□□□□ -1.06
UBLCP1-202ENST00000519276 PARD6AQ9NPB6 346 aa8.43□□□□□ -1.06
UBLCP1-202ENST00000519276 NUAK1O60285 661 aa8.42□□□□□ -1.06
UBLCP1-202ENST00000519276 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
UBLCP1-202ENST00000519276 CLCN7P51798 805 aa8.42□□□□□ -1.06
UBLCP1-202ENST00000519276 EPB41L4BQ9H329 900 aa8.42□□□□□ -1.06
UBLCP1-202ENST00000519276 SMG5Q9UPR3 1016 aaKnown RBP8.42□□□□□ -1.06
UBLCP1-202ENST00000519276 PCDHGC5Q9Y5F6 944 aa8.42□□□□□ -1.06
UBLCP1-202ENST00000519276 PITPNM2Q9BZ72 1349 aa8.41□□□□□ -1.06
UBLCP1-202ENST00000519276 ATG7O95352 703 aa8.41□□□□□ -1.06
UBLCP1-202ENST00000519276 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
UBLCP1-202ENST00000519276 DCP1AQ9NPI6 582 aaPredicted RBP8.41□□□□□ -1.06
UBLCP1-202ENST00000519276 FOXD2O60548 495 aaPredicted RBP8.4□□□□□ -1.06
UBLCP1-202ENST00000519276 ATP2B4P23634 1241 aa8.4□□□□□ -1.06
UBLCP1-202ENST00000519276 ITPKAP23677 461 aa8.4□□□□□ -1.06
UBLCP1-202ENST00000519276 KRT82Q9NSB4 513 aa8.4□□□□□ -1.06
UBLCP1-202ENST00000519276 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.06
UBLCP1-202ENST00000519276 ETV2O00321 342 aaPredicted RBP8.39□□□□□ -1.07
UBLCP1-202ENST00000519276 ZNF862O60290 1169 aa8.39□□□□□ -1.07
UBLCP1-202ENST00000519276 LINC00310P59036 64 aa8.39□□□□□ -1.07
UBLCP1-202ENST00000519276 NKPD1Q17RQ9 610 aa8.39□□□□□ -1.07
UBLCP1-202ENST00000519276 PTPN12Q05209 780 aaKnown RBP8.39□□□□□ -1.07
UBLCP1-202ENST00000519276 CCDC120Q96HB5 630 aa8.39□□□□□ -1.07
UBLCP1-202ENST00000519276 SLAIN2Q9P270 581 aa8.39□□□□□ -1.07
UBLCP1-202ENST00000519276 KIAA0319Q5VV43 1072 aa8.38□□□□□ -1.07
UBLCP1-202ENST00000519276 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBLCP1-202ENST00000519276 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
UBLCP1-202ENST00000519276 CARS2Q9HA77 564 aaKnown RBP8.38□□□□□ -1.07
UBLCP1-202ENST00000519276 SSU72Q9NP77 194 aaKnown RBP8.38□□□□□ -1.07
UBLCP1-202ENST00000519276 NEFMP07197 916 aa8.37□□□□□ -1.07
UBLCP1-202ENST00000519276 AAMPQ13685 434 aa8.37□□□□□ -1.07
UBLCP1-202ENST00000519276 ISL2Q96A47 359 aa8.37□□□□□ -1.07
UBLCP1-202ENST00000519276 SYN1P17600 705 aa8.36□□□□□ -1.07
UBLCP1-202ENST00000519276 SRPK2P78362 688 aaKnown RBP8.36□□□□□ -1.07
UBLCP1-202ENST00000519276 RPS26P11Q5JNZ5 115 aaPredicted RBP8.36□□□□□ -1.07
UBLCP1-202ENST00000519276 GNAT3A8MTJ3 354 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 SRFP11831 508 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 KCNN1Q92952 543 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 ZCCHC4Q9H5U6 513 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 NPR3P17342 541 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 GJD3Q8N144 294 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 KCNK12Q9HB15 430 aa8.35□□□□□ -1.07
UBLCP1-202ENST00000519276 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
UBLCP1-202ENST00000519276 ARID3AQ99856 593 aa8.34□□□□□ -1.07
UBLCP1-202ENST00000519276 IRF2BPLQ9H1B7 796 aa8.34□□□□□ -1.07
UBLCP1-202ENST00000519276 A0A0G2JLL6 359 aaPredicted RBP8.33□□□□□ -1.08
UBLCP1-202ENST00000519276 GSTP1P09211 210 aaKnown RBP8.33□□□□□ -1.08
UBLCP1-202ENST00000519276 RNF214Q8ND24 703 aa8.33□□□□□ -1.08
UBLCP1-202ENST00000519276 PRDM10Q9NQV6 1147 aa8.33□□□□□ -1.08
UBLCP1-202ENST00000519276 GTF3C2Q8WUA4 911 aaPredicted RBP8.32□□□□□ -1.08
UBLCP1-202ENST00000519276 BMP7P18075 431 aa8.31□□□□□ -1.08
UBLCP1-202ENST00000519276 PBXIP1Q96AQ6 731 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms