RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 GTF3C6Q969F1 213 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 LLPHQ9BRT6 129 aaKnown RBP17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 TTF2Q9UNY4 1162 aaKnown RBP17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 ECM29Q5VYK3 1845 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 MYH1P12882 1939 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 DDX60LQ5H9U9 1706 aaKnown RBP17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 USP17L12C9JPN9 530 aa17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 USP17L21D6R901 530 aa17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 FGRP09769 529 aa17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 CERS5Q8N5B7 392 aa17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 GBP4Q96PP9 640 aa17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 ANGEL1Q9UNK9 670 aaKnown RBP17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 DAGLAQ9Y4D2 1042 aa17.73■□□□□ 0.43
TRAPPC9-205ENST00000518839 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 PDE4BQ07343 736 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 APOBRQ0VD83 1088 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 CHST3Q7LGC8 479 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 TEX11Q8IYF3 940 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 NECAB1Q8N987 351 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 TEKT1Q969V4 418 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 MKRN1Q9UHC7 482 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 ARFGEF1Q9Y6D6 1849 aa17.72■□□□□ 0.43
TRAPPC9-205ENST00000518839 ROBO3Q96MS0 1386 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 ERICH2A1L162 156 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 SH2B2O14492 632 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 ORC4O43929 436 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 DHX16O60231 1041 aaKnown RBP17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 KDM4AO75164 1064 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 PDCP20941 246 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 LIFRP42702 1097 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 CYB5R4Q7L1T6 521 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 LARGE2Q8N3Y3 721 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
TRAPPC9-205ENST00000518839 WDR33Q9C0J8 1336 aaKnown RBP17.71■□□□□ 0.42
TRAPPC9-205ENST00000518839 PSDA5PKW4 1024 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 PTMSP20962 102 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 GJB2P29033 226 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 PDIA3P30101 505 aaKnown RBP17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 PTGER2P43116 358 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 RHBDL3P58872 404 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 ST3GAL1Q11201 340 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 STK3Q13188 491 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 RRP12Q5JTH9 1297 aaKnown RBP17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 C12orf60Q5U649 245 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 TGFBRAP1Q8WUH2 860 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 ZNF287Q9HBT7 754 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
TRAPPC9-205ENST00000518839 KLF18A0A0U1RQI7 1052 aa17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 F8W031 263 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 IFIT3O14879 490 aaKnown RBP17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 BRD1O95696 1058 aa17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 HMGN5P82970 282 aaKnown RBP17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 IGDCC4Q8TDY8 1250 aa17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
TRAPPC9-205ENST00000518839 POLR3DP05423 398 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 IARSP41252 1262 aaKnown RBP17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 CRKP46108 304 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 SCRN1Q12765 414 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 SYNE3Q6ZMZ3 975 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 IQCA1Q86XH1 822 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 NIM1KQ8IY84 436 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 TAOK3Q9H2K8 898 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 SERPINA10Q9UK55 444 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 FLT1P17948 1338 aa17.68■□□□□ 0.42
TRAPPC9-205ENST00000518839 CCDC69A6NI79 296 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 DDX11L8A8MPP1 907 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 GOLGA8BA8MQT2 603 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 USP17L8P0C7I0 530 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 RCAN1P53805 252 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 WTAPQ15007 396 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 CCDC178Q5BJE1 867 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 MAPKAPK5Q8IW41 473 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 SMARCC2Q8TAQ2 1214 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 LY9Q9HBG7 655 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 SPON1Q9HCB6 807 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 LTBP3Q9NS15 1303 aa17.67■□□□□ 0.42
TRAPPC9-205ENST00000518839 ADAMTSL1Q8N6G6 1762 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 CYP2D7A0A087X1C5 515 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 YDJCA8MPS7 323 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 GOLGA6L22H0YM25 854 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 STX6O43752 255 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 MCM4P33991 863 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms