RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 CRNKL1Q9BZJ0 848 aaKnown RBP21.3■■□□□ 1
TRAM1-202ENST00000518678 FAM198AQ9UFP1 575 aa21.3■■□□□ 1
TRAM1-202ENST00000518678 CDC45O75419 566 aa21.29■■□□□ 1
TRAM1-202ENST00000518678 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
TRAM1-202ENST00000518678 TNNI2P48788 182 aa21.29■■□□□ 1
TRAM1-202ENST00000518678 FAM83AQ86UY5 434 aa21.29■■□□□ 1
TRAM1-202ENST00000518678 TGFBRAP1Q8WUH2 860 aa21.29■■□□□ 1
TRAM1-202ENST00000518678 DDX4Q9NQI0 724 aaKnown RBP21.29■■□□□ 1
TRAM1-202ENST00000518678 ABT1Q9ULW3 272 aaKnown RBP21.29■■□□□ 1
TRAM1-202ENST00000518678 ENTPD3O75355 529 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 GNAT2P19087 354 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 CCDC129Q6ZRS4 1044 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 CDC37L1Q7L3B6 337 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 KRT26Q7Z3Y9 468 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 SULF1Q8IWU6 871 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 SCAF8Q9UPN6 1271 aaKnown RBP21.28■■□□□ 1
TRAM1-202ENST00000518678 RAD50Q92878 1312 aa21.28■■□□□ 1
TRAM1-202ENST00000518678 PICALMQ13492 652 aa21.27■■□□□ 1
TRAM1-202ENST00000518678 RASA3Q14644 834 aa21.27■■□□□ 1
TRAM1-202ENST00000518678 ZNF589Q86UQ0 364 aaPredicted RBP21.27■■□□□ 1
TRAM1-202ENST00000518678 USP48Q86UV5 1035 aa21.27■■□□□ 1
TRAM1-202ENST00000518678 FAM151AQ8WW52 585 aa21.27■■□□□ 1
TRAM1-202ENST00000518678 DEFB129Q9H1M3 183 aa21.27■■□□□ 1
TRAM1-202ENST00000518678 PPP2R3BQ9Y5P8 575 aa21.27■■□□□ 1
TRAM1-202ENST00000518678 SLC4A4Q9Y6R1 1079 aa21.27■■□□□ 1
TRAM1-202ENST00000518678 FLT1P17948 1338 aa21.27■□□□□ 0.99
TRAM1-202ENST00000518678 CCDC171Q6TFL3 1326 aa21.27■□□□□ 0.99
TRAM1-202ENST00000518678 RASSF10A6NK89 507 aa21.26■□□□□ 0.99
TRAM1-202ENST00000518678 ADM5C9JUS6 153 aa21.26■□□□□ 0.99
TRAM1-202ENST00000518678 PRKAB2O43741 272 aa21.26■□□□□ 0.99
TRAM1-202ENST00000518678 USP5P45974 858 aa21.26■□□□□ 0.99
TRAM1-202ENST00000518678 MFAP1P55081 439 aaKnown RBP21.26■□□□□ 0.99
TRAM1-202ENST00000518678 MAPKAPK5Q8IW41 473 aa21.26■□□□□ 0.99
TRAM1-202ENST00000518678 SDR42E1Q8WUS8 393 aa21.26■□□□□ 0.99
TRAM1-202ENST00000518678 RPAP1Q9BWH6 1393 aaPredicted RBP21.25■□□□□ 0.99
TRAM1-202ENST00000518678 PATL2C9JE40 543 aaKnown RBP21.25■□□□□ 0.99
TRAM1-202ENST00000518678 FOXN1O15353 648 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 TCP10Q12799 353 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 GRM1Q13255 1194 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 DEFB115Q30KQ5 88 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 CYP4F22Q6NT55 531 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 CASC1Q6TDU7 716 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 ZFPM1Q8IX07 1006 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 TMEM39BQ9GZU3 492 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 OSBPL5Q9H0X9 879 aaPredicted RBP21.25■□□□□ 0.99
TRAM1-202ENST00000518678 IL25Q9H293 177 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 ZNF408Q9H9D4 720 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 ATP8A2Q9NTI2 1148 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 THSD7BQ9C0I4 1608 aa21.25■□□□□ 0.99
TRAM1-202ENST00000518678 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
TRAM1-202ENST00000518678 NAV1Q8NEY1 1877 aa21.24■□□□□ 0.99
TRAM1-202ENST00000518678 DDX60LQ5H9U9 1706 aaKnown RBP21.24■□□□□ 0.99
TRAM1-202ENST00000518678 GSG1L2A8MUP6 293 aa21.24■□□□□ 0.99
TRAM1-202ENST00000518678 SGSM2O43147 1006 aa21.24■□□□□ 0.99
TRAM1-202ENST00000518678 CELF2O95319 508 aaKnown RBP21.24■□□□□ 0.99
TRAM1-202ENST00000518678 DCP1AQ9NPI6 582 aaPredicted RBP21.24■□□□□ 0.99
TRAM1-202ENST00000518678 GIMAP6Q6P9H5 292 aa21.23■□□□□ 0.99
TRAM1-202ENST00000518678 TEPSINQ96N21 525 aa21.23■□□□□ 0.99
TRAM1-202ENST00000518678 ESYT1Q9BSJ8 1104 aa21.23■□□□□ 0.99
TRAM1-202ENST00000518678 ATRNL1Q5VV63 1379 aa21.23■□□□□ 0.99
TRAM1-202ENST00000518678 FOXP2O15409 715 aa21.22■□□□□ 0.99
TRAM1-202ENST00000518678 VPS53Q5VIR6 699 aa21.22■□□□□ 0.99
TRAM1-202ENST00000518678 SH3BP5LQ7L8J4 393 aa21.22■□□□□ 0.99
TRAM1-202ENST00000518678 CDCA5Q96FF9 252 aa21.22■□□□□ 0.99
TRAM1-202ENST00000518678 EPB41L4AQ9HCS5 686 aaPredicted RBP21.22■□□□□ 0.99
TRAM1-202ENST00000518678 WDR33Q9C0J8 1336 aaKnown RBP21.22■□□□□ 0.99
TRAM1-202ENST00000518678 MYH1P12882 1939 aa21.21■□□□□ 0.99
TRAM1-202ENST00000518678 APPP05067 770 aa21.21■□□□□ 0.99
TRAM1-202ENST00000518678 HSPD1P10809 573 aaKnown RBP21.21■□□□□ 0.99
TRAM1-202ENST00000518678 PRAMEF18Q5VWM3 479 aa21.21■□□□□ 0.99
TRAM1-202ENST00000518678 PAXIP1Q6ZW49 1069 aaPredicted RBP21.21■□□□□ 0.99
TRAM1-202ENST00000518678 IFNL3Q8IZI9 196 aa21.21■□□□□ 0.99
TRAM1-202ENST00000518678 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
TRAM1-202ENST00000518678 DHX36Q9H2U1 1008 aaKnown RBP21.21■□□□□ 0.99
TRAM1-202ENST00000518678 TLL2Q9Y6L7 1015 aa21.21■□□□□ 0.99
TRAM1-202ENST00000518678 DDTLA6NHG4 134 aaPredicted RBP21.2■□□□□ 0.98
TRAM1-202ENST00000518678 AOC2O75106 756 aa21.2■□□□□ 0.98
TRAM1-202ENST00000518678 NBPF12Q5TAG4 269 aaPredicted RBP21.2■□□□□ 0.98
TRAM1-202ENST00000518678 ZSCAN29Q8IWY8 852 aaPredicted RBP21.2■□□□□ 0.98
TRAM1-202ENST00000518678 CDAN1Q8IWY9 1227 aa21.2■□□□□ 0.98
TRAM1-202ENST00000518678 CAPNS2Q96L46 248 aa21.2■□□□□ 0.98
TRAM1-202ENST00000518678 NACAP1Q9BZK3 213 aa21.2■□□□□ 0.98
TRAM1-202ENST00000518678 MCM9Q9NXL9 1143 aa21.2■□□□□ 0.98
TRAM1-202ENST00000518678 SAP30BPQ9UHR5 308 aaKnown RBP21.2■□□□□ 0.98
TRAM1-202ENST00000518678 ALX1Q15699 326 aa21.19■□□□□ 0.98
TRAM1-202ENST00000518678 SUPT20HL1Q3ZLR7 823 aa21.19■□□□□ 0.98
TRAM1-202ENST00000518678 DSCC1Q9BVC3 393 aa21.19■□□□□ 0.98
TRAM1-202ENST00000518678 PALD1Q9ULE6 856 aa21.19■□□□□ 0.98
TRAM1-202ENST00000518678 BAZ2AQ9UIF9 1905 aaKnown RBP21.19■□□□□ 0.98
TRAM1-202ENST00000518678 TDO2P48775 406 aa21.18■□□□□ 0.98
TRAM1-202ENST00000518678 HOOK2Q96ED9 719 aa21.18■□□□□ 0.98
TRAM1-202ENST00000518678 CSRNP1Q96S65 589 aa21.18■□□□□ 0.98
TRAM1-202ENST00000518678 NAPBQ9H115 298 aa21.18■□□□□ 0.98
TRAM1-202ENST00000518678 ARPP21Q9UBL0 812 aaPredicted RBP21.18■□□□□ 0.98
TRAM1-202ENST00000518678 ZMYM6O95789 1325 aa21.18■□□□□ 0.98
TRAM1-202ENST00000518678 SSC5DA1L4H1 1573 aa21.18■□□□□ 0.98
TRAM1-202ENST00000518678 USP17L12C9JPN9 530 aa21.17■□□□□ 0.98
TRAM1-202ENST00000518678 USP17L21D6R901 530 aa21.17■□□□□ 0.98
TRAM1-202ENST00000518678 POLR3DP05423 398 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms