RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 TOM1L2Q6ZVM7 507 aa8.89□□□□□ -0.99
CCDC6-203ENST00000518638 MPHOSPH9Q99550 1183 aa8.89□□□□□ -0.99
CCDC6-203ENST00000518638 SSBP4Q9BWG4 385 aaPredicted RBP8.89□□□□□ -0.99
CCDC6-203ENST00000518638 GPC6Q9Y625 555 aaPredicted RBP8.89□□□□□ -0.99
CCDC6-203ENST00000518638 PAPPAQ13219 1627 aa8.89□□□□□ -0.99
CCDC6-203ENST00000518638 ACEP12821 1306 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 WDR17Q8IZU2 1322 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 ATP2B4P23634 1241 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 SPEM2Q0P670 501 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 SFSWAPQ12872 951 aaKnown RBP8.88□□□□□ -0.99
CCDC6-203ENST00000518638 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 ALDH16A1Q8IZ83 802 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 PHACTR1Q9C0D0 580 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 HCN4Q9Y3Q4 1203 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 COL24A1Q17RW2 1714 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 TNS2Q63HR2 1409 aa8.88□□□□□ -0.99
CCDC6-203ENST00000518638 SLIT3O75094 1523 aa8.87□□□□□ -0.99
CCDC6-203ENST00000518638 YBX3P16989 372 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC6-203ENST00000518638 SHISA2Q6UWI4 295 aa8.87□□□□□ -0.99
CCDC6-203ENST00000518638 NEUROD4Q9HD90 331 aa8.87□□□□□ -0.99
CCDC6-203ENST00000518638 CCDC7Q96M83 1385 aa8.86□□□□□ -0.99
CCDC6-203ENST00000518638 ABCC6O95255 1503 aa8.86□□□□□ -0.99
CCDC6-203ENST00000518638 CARNS1A5YM72 827 aa8.86□□□□□ -0.99
CCDC6-203ENST00000518638 EXOC5O00471 708 aa8.86□□□□□ -0.99
CCDC6-203ENST00000518638 MARCH10Q8NA82 808 aaPredicted RBP8.86□□□□□ -0.99
CCDC6-203ENST00000518638 RHPN1Q8TCX5 695 aa8.86□□□□□ -0.99
CCDC6-203ENST00000518638 COL26A1Q96A83 441 aa8.86□□□□□ -0.99
CCDC6-203ENST00000518638 VTI1AQ96AJ9 217 aa8.86□□□□□ -0.99
CCDC6-203ENST00000518638 TRPM1Q7Z4N2 1603 aa8.85□□□□□ -0.99
CCDC6-203ENST00000518638 PDE4CQ08493 712 aa8.85□□□□□ -0.99
CCDC6-203ENST00000518638 RTN1Q16799 776 aa8.85□□□□□ -0.99
CCDC6-203ENST00000518638 RAB44Q7Z6P3 723 aaPredicted RBP8.85□□□□□ -0.99
CCDC6-203ENST00000518638 CARD10Q9BWT7 1032 aa8.85□□□□□ -0.99
CCDC6-203ENST00000518638 ATP10DQ9P241 1426 aa8.85□□□□□ -0.99
CCDC6-203ENST00000518638 QRICH2Q9H0J4 1663 aa8.85□□□□□ -0.99
CCDC6-203ENST00000518638 COL18A1P39060 1754 aa8.84□□□□□ -0.99
CCDC6-203ENST00000518638 CPSF1Q10570 1443 aaKnown RBP8.84□□□□□ -0.99
CCDC6-203ENST00000518638 CDK19Q9BWU1 502 aa8.84□□□□□ -0.99
CCDC6-203ENST00000518638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.84□□□□□ -0.99
CCDC6-203ENST00000518638 PCMTD2Q9NV79 361 aa8.84□□□□□ -0.99
CCDC6-203ENST00000518638 BTAF1O14981 1849 aa8.84□□□□□ -0.99
CCDC6-203ENST00000518638 ZBTB7CA1YPR0 619 aa8.83□□□□□ -1
CCDC6-203ENST00000518638 PTCD1O75127 700 aaKnown RBP8.83□□□□□ -1
CCDC6-203ENST00000518638 HMGB2P26583 209 aaKnown RBP8.83□□□□□ -1
CCDC6-203ENST00000518638 SSFA2P28290 1259 aa8.83□□□□□ -1
CCDC6-203ENST00000518638 PTF1AQ7RTS3 328 aa8.83□□□□□ -1
CCDC6-203ENST00000518638 KCNH5Q8NCM2 988 aa8.83□□□□□ -1
CCDC6-203ENST00000518638 MYO19Q96H55 970 aa8.83□□□□□ -1
CCDC6-203ENST00000518638 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
CCDC6-203ENST00000518638 KRTAP4-7Q9BYR0 210 aa8.83□□□□□ -1
CCDC6-203ENST00000518638 USP6P35125 1406 aa8.82□□□□□ -1
CCDC6-203ENST00000518638 PPIP5K1Q6PFW1 1433 aa8.82□□□□□ -1
CCDC6-203ENST00000518638 HIF1AQ16665 826 aa8.82□□□□□ -1
CCDC6-203ENST00000518638 FMR1NBQ8N0W7 255 aaPredicted RBP8.82□□□□□ -1
CCDC6-203ENST00000518638 JPH1Q9HDC5 661 aaPredicted RBP8.82□□□□□ -1
CCDC6-203ENST00000518638 ADCY9O60503 1353 aa8.82□□□□□ -1
CCDC6-203ENST00000518638 KIAA1210Q9ULL0 1709 aa8.81□□□□□ -1
CCDC6-203ENST00000518638 LCE1DQ5T752 114 aa8.81□□□□□ -1
CCDC6-203ENST00000518638 B4GALNT3Q6L9W6 998 aa8.81□□□□□ -1
CCDC6-203ENST00000518638 MKNK1Q9BUB5 465 aa8.81□□□□□ -1
CCDC6-203ENST00000518638 ANKIB1Q9P2G1 1089 aa8.81□□□□□ -1
CCDC6-203ENST00000518638 ARID1BQ8NFD5 2236 aaPredicted RBP8.81□□□□□ -1
CCDC6-203ENST00000518638 ZNF827Q17R98 1081 aa8.8□□□□□ -1
CCDC6-203ENST00000518638 PHLDB3Q6NSJ2 640 aa8.8□□□□□ -1
CCDC6-203ENST00000518638 CAPN12Q6ZSI9 719 aa8.8□□□□□ -1
CCDC6-203ENST00000518638 HSH2DQ96JZ2 352 aa8.8□□□□□ -1
CCDC6-203ENST00000518638 SUSD3Q96L08 255 aa8.8□□□□□ -1
CCDC6-203ENST00000518638 BRD7Q9NPI1 651 aa8.8□□□□□ -1
CCDC6-203ENST00000518638 PIK3C2AO00443 1686 aa8.8□□□□□ -1
CCDC6-203ENST00000518638 RGPD5Q99666 1765 aa8.79□□□□□ -1
CCDC6-203ENST00000518638 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
CCDC6-203ENST00000518638 C16orf46Q6P387 395 aa8.79□□□□□ -1
CCDC6-203ENST00000518638 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
CCDC6-203ENST00000518638 TFCP2L1Q9NZI6 479 aa8.79□□□□□ -1
CCDC6-203ENST00000518638 LRFN2Q9ULH4 789 aa8.79□□□□□ -1
CCDC6-203ENST00000518638 PNPLA7Q6ZV29 1317 aa8.79□□□□□ -1
CCDC6-203ENST00000518638 CEP350Q5VT06 3117 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 TUBGCP6Q96RT7 1819 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 IRAK1P51617 712 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 KCNQ4P56696 695 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 DGKZQ13574 1117 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 COX20Q5RI15 118 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 IER5Q5VY09 327 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 ARHGEF25Q86VW2 580 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 ZNF280CQ8ND82 737 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 NLGN2Q8NFZ4 835 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 NUDT8Q8WV74 236 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 ACSBG1Q96GR2 724 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 CEP63Q96MT8 703 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 UBE2OQ9C0C9 1292 aaKnown RBP8.78□□□□□ -1
CCDC6-203ENST00000518638 SLC6A14Q9UN76 642 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 CD2APQ9Y5K6 639 aa8.78□□□□□ -1
CCDC6-203ENST00000518638 KAT6BQ8WYB5 2073 aa8.77□□□□□ -1
CCDC6-203ENST00000518638 TGFBR3LH3BV60 316 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 IL2RBP14784 551 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 C11orf91Q3C1V1 193 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
CCDC6-203ENST00000518638 WFDC12Q8WWY7 111 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 BHMTQ93088 406 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms