RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TEP1Q99973 2627 aaKnown RBP4.98□□□□□ -1.61
CPNE3-204ENST00000517862 KRT38O76015 456 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 CTHP32929 405 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 ID4P47928 161 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 RBM25P49756 843 aaKnown RBP4.98□□□□□ -1.61
CPNE3-204ENST00000517862 SRPK2P78362 688 aaKnown RBP4.98□□□□□ -1.61
CPNE3-204ENST00000517862 MRPS5P82675 430 aaKnown RBP4.98□□□□□ -1.61
CPNE3-204ENST00000517862 CDCA8Q53HL2 280 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 PPP1R26Q5T8A7 1209 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-204ENST00000517862 TTLL6Q8N841 843 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 ZNF333Q96JL9 665 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 UIMC1Q96RL1 719 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 PTPN22Q9Y2R2 807 aa4.98□□□□□ -1.61
CPNE3-204ENST00000517862 ZNF541Q9H0D2 1346 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 DOT1LQ8TEK3 1739 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 LTN1O94822 1766 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 NSD2O96028 1365 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 ANKRD36BQ8N2N9 1353 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 CCDC7Q96M83 1385 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 GCP02774 474 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 MTMR2Q13614 643 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 FBLN7Q53RD9 439 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 PRRT3Q5FWE3 981 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 DDX54Q8TDD1 881 aaKnown RBP4.97□□□□□ -1.61
CPNE3-204ENST00000517862 PPP1R12CQ9BZL4 782 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 KCNH6Q9H252 994 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 TAOK3Q9H2K8 898 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 ZNF395Q9H8N7 513 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-204ENST00000517862 ANKARQ7Z5J8 1434 aa4.97□□□□□ -1.61
CPNE3-204ENST00000517862 PALM3A6NDB9 673 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-204ENST00000517862 SPDYE3A6NKU9 549 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 CYSRT1A8MQ03 144 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 CFAP99D6REC4 459 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 RHOQP17081 205 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 LMOD1P29536 600 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-204ENST00000517862 GJA5P36382 358 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 PRR7Q8TB68 274 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 NACC1Q96RE7 527 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 UCN2Q96RP3 112 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 PLVAPQ9BX97 442 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 CFHR5Q9BXR6 569 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 GLIS2Q9BZE0 524 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-204ENST00000517862 SH2B1Q9NRF2 756 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-204ENST00000517862 THEGQ9P2T0 379 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 PHF24Q9UPV7 400 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 CDH23Q9H251 3354 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 RGPD5Q99666 1765 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 E9PCH4 1651 aa4.96□□□□□ -1.62
CPNE3-204ENST00000517862 USP24Q9UPU5 2620 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 MON2Q7Z3U7 1717 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 PRR33A8MZF0 331 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 C4orf48Q5BLP8 95 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 PRICKLE2Q7Z3G6 844 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 GAS2L1Q99501 681 aaPredicted RBP4.95□□□□□ -1.62
CPNE3-204ENST00000517862 UBE2OQ9C0C9 1292 aaKnown RBP4.95□□□□□ -1.62
CPNE3-204ENST00000517862 GGA1Q9UJY5 639 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 DYRK1BQ9Y463 629 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 IVNS1ABPQ9Y6Y0 642 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 DLEC1Q9Y238 1755 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 CEP162Q5TB80 1403 aa4.95□□□□□ -1.62
CPNE3-204ENST00000517862 C21orf2O43822 256 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 EPXP11678 715 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 IL2RBP14784 551 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 WASHC4Q2M389 1173 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 SLC9C1Q4G0N8 1177 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 USP50Q70EL3 339 aaPredicted RBP4.94□□□□□ -1.62
CPNE3-204ENST00000517862 ABTB2Q8N961 1025 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 HELBQ8NG08 1087 aaPredicted RBP4.94□□□□□ -1.62
CPNE3-204ENST00000517862 NUCKS1Q9H1E3 243 aaKnown RBP4.94□□□□□ -1.62
CPNE3-204ENST00000517862 ALG2Q9H553 416 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 TFIP11Q9UBB9 837 aaKnown RBP4.94□□□□□ -1.62
CPNE3-204ENST00000517862 USTQ9Y2C2 406 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 LTBP3Q9NS15 1303 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 PTPN13Q12923 2485 aa4.94□□□□□ -1.62
CPNE3-204ENST00000517862 PER1O15534 1290 aaPredicted RBP4.93□□□□□ -1.62
CPNE3-204ENST00000517862 BRD1O95696 1058 aa4.93□□□□□ -1.62
CPNE3-204ENST00000517862 EPS15P42566 896 aa4.93□□□□□ -1.62
CPNE3-204ENST00000517862 KCNA1Q09470 495 aa4.93□□□□□ -1.62
CPNE3-204ENST00000517862 NR6A1Q15406 480 aa4.93□□□□□ -1.62
CPNE3-204ENST00000517862 DNAH12Q6ZR08 3092 aa4.93□□□□□ -1.62
CPNE3-204ENST00000517862 SMG6Q86US8 1419 aaKnown RBP4.93□□□□□ -1.62
CPNE3-204ENST00000517862 PPM1EQ8WY54 764 aa4.93□□□□□ -1.62
CPNE3-204ENST00000517862 SHISA4Q96DD7 197 aa4.93□□□□□ -1.62
CPNE3-204ENST00000517862 RIF1Q5UIP0 2472 aaKnown RBP4.92□□□□□ -1.62
CPNE3-204ENST00000517862 PALLDQ8WX93 1383 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 REV3LO60673 3130 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 C8AP07357 584 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 GYS1P13807 737 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 MAGEA10P43363 369 aaPredicted RBP4.92□□□□□ -1.62
CPNE3-204ENST00000517862 UBE2Q1Q7Z7E8 422 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 GPC2Q8N158 579 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 C2orf69Q8N8R5 385 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 TRIM11Q96F44 468 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 R3HDMLQ9H3Y0 253 aa4.92□□□□□ -1.62
CPNE3-204ENST00000517862 ZMYND8Q9ULU4 1186 aaPredicted RBP4.92□□□□□ -1.62
CPNE3-204ENST00000517862 FAM186AA6NE01 2351 aa4.91□□□□□ -1.62
CPNE3-204ENST00000517862 ANKRD17O75179 2603 aaKnown RBP4.91□□□□□ -1.62
CPNE3-204ENST00000517862 BPTFQ12830 3046 aa4.91□□□□□ -1.62
CPNE3-204ENST00000517862 BMP4P12644 408 aa4.91□□□□□ -1.62
CPNE3-204ENST00000517862 PDE4CQ08493 712 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms