RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TSHZ1Q6ZSZ6 1077 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 FMNL3Q8IVF7 1028 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ABTB2Q8N961 1025 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 FAM184AQ8NB25 1140 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ANKRD20A12PQ8NF67 263 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 GPR152Q8TDT2 470 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZNF526Q8TF50 670 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 PPM1EQ8WY54 764 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 UBL7Q96S82 380 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ANO2Q9NQ90 1003 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 USTQ9Y2C2 406 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 PPME1Q9Y570 386 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 LINC01387J3KSC0 135 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 PES1O00541 588 aaKnown RBP5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 CCP110O43303 1012 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 GLB1P16278 677 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 SSTR4P31391 388 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 CD97P48960 835 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 RAD51AP2Q09MP3 1159 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZRSR1Q15695 479 aaKnown RBP5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 PHLDB3Q6NSJ2 640 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 TXNDC11Q6PKC3 985 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 ANKRD23Q86SG2 305 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 SLC51AQ86UW1 340 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 ATCAYQ86WG3 371 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 CACTIN-AS1Q8N1I8 211 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 HELQQ8TDG4 1101 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 PIK3R5Q8WYR1 880 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 SYAP1Q96A49 352 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 TBC1D32Q96NH3 1257 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 NOL10Q9BSC4 688 aaKnown RBP5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 TEX13AQ9BXU3 409 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 MUC3BQ9H195 1237 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 SPTLC3Q9NUV7 552 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 KCNK4Q9NYG8 393 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 CTNNA3Q9UI47 895 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 MTMR7Q9Y216 660 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 NUB1Q9Y5A7 615 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 UHRF1BP1LA0JNW5 1464 aa5.7□□□□□ -1.5
HMGB1P19-201ENST00000517578 MAP3K1Q13233 1512 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZMYM4Q5VZL5 1548 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 ARHGAP31Q2M1Z3 1444 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 ATP8B1O43520 1251 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 KIF4AO95239 1232 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 MPSTP25325 297 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 MAGEA9P43362 315 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 HNRNPH2P55795 449 aaKnown RBP5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 HYAL2Q12891 473 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZNF211Q13398 564 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZRSR2Q15696 482 aaKnown RBP5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 MCTP2Q6DN12 878 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 ARMC10Q8N2F6 343 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 STAG1Q8WVM7 1258 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 SNX21Q969T3 373 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 HIRIP3Q9BW71 556 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 LACRTQ9GZZ8 138 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 PCMTD2Q9NV79 361 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 RAXQ9Y2V3 346 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 DDX49Q9Y6V7 483 aaKnown RBP5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 KIF21BO75037 1637 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 PLEKHH2Q8IVE3 1493 aa5.69□□□□□ -1.5
HMGB1P19-201ENST00000517578 KANK1Q14678 1352 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZBTB7CA1YPR0 619 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 KIF2AO00139 706 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 MED26O95402 600 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 CYP2E1P05181 493 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 TPM1P09493 284 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 U2AF2P26368 475 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 CD68P34810 354 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 DNM1Q05193 864 aaKnown RBP5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 CCDC96Q2M329 555 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 CEP135Q66GS9 1140 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 MCTP1Q6DN14 999 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 RINLQ6ZS11 566 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 GAS2L3Q86XJ1 694 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 SMC5Q8IY18 1101 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 MSL3Q8N5Y2 521 aaKnown RBP5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZNF397Q8NF99 534 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 KIF18AQ8NI77 898 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 EDEM1Q92611 657 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 SGSM3Q96HU1 749 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 TSPAN18Q96SJ8 248 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 UNC13AQ9UPW8 1703 aa5.68□□□□□ -1.5
HMGB1P19-201ENST00000517578 ABCA5Q8WWZ7 1642 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 ANKRD33BA6NCL7 494 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 SMTNL1A8MU46 457 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 KIAA1324LA8MWY0 1029 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 TMCO5BA8MYB1 307 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 MYO1CO00159 1063 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 COQ9O75208 318 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 SMNDC1O75940 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 TGFB1P01137 390 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 IGLV1-40P01703 118 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 TUBB4AP04350 444 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 EPHA1P21709 976 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 CDC27P30260 824 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 TRAF1Q13077 416 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 RAB3GAP1Q15042 981 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 HSP90B2PQ58FF3 399 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms