RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CC2D1AQ6P1N0 951 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-203ENST00000517490 CCDC91Q7Z6B0 441 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 TAF4BQ92750 862 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 CDK5RAP3Q96JB5 506 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 PDE11AQ9HCR9 933 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 SYNRGQ9UMZ2 1314 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 ODF2Q5BJF6 829 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 NBPF6Q5VWK0 638 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 E4F1Q66K89 784 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-203ENST00000517490 ZNF790Q6PG37 636 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 RPGRIP1Q96KN7 1286 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 NBPF4Q96M43 638 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 WWC3Q9ULE0 1092 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 TBX22Q9Y458 520 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 ZC3H6P61129 1189 aaKnown RBP7.55□□□□□ -1.2
CPNE3-203ENST00000517490 SLC9C2Q5TAH2 1124 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 CATIPQ7Z7H3 387 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 DESI2Q9BSY9 194 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 CENPHQ9H3R5 247 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 ZBTB3Q9H5J0 574 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 L2HGDHQ9H9P8 463 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 ANKRD18BA2A2Z9 1011 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 TACC1O75410 805 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 FGFR1OPO95684 399 aaKnown RBP7.54□□□□□ -1.2
CPNE3-203ENST00000517490 ZMYM1Q5SVZ6 1142 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 RNF187Q5TA31 235 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-203ENST00000517490 ARMCX5Q6P1M9 558 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 PLBD2Q8NHP8 589 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-203ENST00000517490 BCCIPQ9P287 314 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPNE3-203ENST00000517490 LRP2BPQ9P2M1 347 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 LUC7L2Q9Y383 392 aaKnown RBP7.54□□□□□ -1.2
CPNE3-203ENST00000517490 TMEM2Q9UHN6 1383 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
CPNE3-203ENST00000517490 MTIF2P46199 727 aaKnown RBP7.54□□□□□ -1.2
CPNE3-203ENST00000517490 UBXN1Q04323 297 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 RAD51AP2Q09MP3 1159 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 LDHAL6AQ6ZMR3 332 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 IQCA1Q86XH1 822 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 POTEDQ86YR6 584 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 SPOCK2Q92563 424 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 TADA3O75528 432 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 EVA1CP58658 441 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 KIF5AQ12840 1032 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 CCDC122Q5T0U0 273 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 TRIM47Q96LD4 638 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 TANGO6Q9C0B7 1094 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 KIF20BQ96Q89 1820 aa7.54□□□□□ -1.2
CPNE3-203ENST00000517490 ZMYM6O95789 1325 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 RXRAP19793 462 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 KIF23Q02241 960 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-203ENST00000517490 DIS3L2Q8IYB7 885 aaKnown RBP7.53□□□□□ -1.2
CPNE3-203ENST00000517490 IQUBQ8NA54 791 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 CEP89Q96ST8 783 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 PCDHA5Q9Y5H7 936 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 USP31Q70CQ4 1352 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 ATP1A3P13637 1013 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 SLC5A1P13866 664 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 GTF2E1P29083 439 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-203ENST00000517490 PLCD1P51178 756 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 NLRP5P59047 1200 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 B4GALNT4Q76KP1 1039 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 TRMT44Q8IYL2 757 aaKnown RBP7.53□□□□□ -1.2
CPNE3-203ENST00000517490 CAPZA3Q96KX2 299 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 GPR108Q9NPR9 543 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 MYO1AQ9UBC5 1043 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 GOLGA6CA6NDK9 693 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 MINDY4BA8MYZ0 360 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 MYO1CO00159 1063 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 PSMA7O14818 248 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 GPAA1O43292 621 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 DEXIO95424 95 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 GOLGA6DP0CG33 693 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 H2AFXP16104 143 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-203ENST00000517490 ATF3P18847 181 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 OTUD6BQ8N6M0 293 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 NFATC2IPQ8NCF5 419 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 TSGA10Q9BZW7 698 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 GOLGA6AQ9NYA3 693 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 SERTAD1Q9UHV2 236 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 ADAM21Q9UKJ8 722 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 A2ML1A8K2U0 1454 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 ROBO2Q9HCK4 1378 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 ERCC5P28715 1186 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-203ENST00000517490 KRT2P35908 639 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 CCDC96Q2M329 555 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 PROSER3Q2NL68 480 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 HSP90AB3PQ58FF7 597 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 USPL1Q5W0Q7 1092 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 KIDINS220Q9ULH0 1771 aa7.53□□□□□ -1.2
CPNE3-203ENST00000517490 PIK3C2BO00750 1634 aa7.52□□□□□ -1.2
CPNE3-203ENST00000517490 CCT6AP40227 531 aaKnown RBP7.52□□□□□ -1.2
CPNE3-203ENST00000517490 CACNA2D4Q7Z3S7 1137 aa7.52□□□□□ -1.2
CPNE3-203ENST00000517490 ENOX1Q8TC92 643 aaKnown RBP7.52□□□□□ -1.2
CPNE3-203ENST00000517490 ST7Q9NRC1 585 aa7.52□□□□□ -1.2
CPNE3-203ENST00000517490 CT47A1Q5JQC4 288 aaPredicted RBP7.52□□□□□ -1.21
CPNE3-203ENST00000517490 SPECC1Q5M775 1068 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms