RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 RPL6Q02878 288 aaKnown RBP6.88□□□□□ -1.31
LINC00534-201ENST00000517400 PDE3AQ14432 1141 aa6.88□□□□□ -1.31
LINC00534-201ENST00000517400 SLITRK4Q8IW52 837 aa6.88□□□□□ -1.31
LINC00534-201ENST00000517400 SREK1Q8WXA9 508 aaKnown RBP6.88□□□□□ -1.31
LINC00534-201ENST00000517400 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
LINC00534-201ENST00000517400 TMPRSS13Q9BYE2 586 aa6.88□□□□□ -1.31
LINC00534-201ENST00000517400 UBP1Q9NZI7 540 aa6.88□□□□□ -1.31
LINC00534-201ENST00000517400 AOC2O75106 756 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 WISP1O95388 367 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 SLFN14P0C7P3 912 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
LINC00534-201ENST00000517400 LIG1P18858 919 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 CRKP46108 304 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 ARID5AQ03989 594 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 APOBRQ0VD83 1088 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 COL9A2Q14055 689 aaPredicted RBP6.87□□□□□ -1.31
LINC00534-201ENST00000517400 SF3A1Q15459 793 aaKnown RBP6.87□□□□□ -1.31
LINC00534-201ENST00000517400 KIAA1211Q6ZU35 1233 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 NKD1Q969G9 470 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 ACSBG1Q96GR2 724 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 SEC16BQ96JE7 1060 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 RUSC1Q9BVN2 902 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 PCDHA4Q9UN74 947 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 SNCAIPQ9Y6H5 919 aa6.87□□□□□ -1.31
LINC00534-201ENST00000517400 URB2Q14146 1524 aaKnown RBP6.86□□□□□ -1.31
LINC00534-201ENST00000517400 GFRA2O00451 464 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 BPNT1O95861 308 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 COL8A1P27658 744 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 SOX9P48436 509 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 GRIK4Q16099 956 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 CWF19L2Q2TBE0 894 aaKnown RBP6.86□□□□□ -1.31
LINC00534-201ENST00000517400 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.86□□□□□ -1.31
LINC00534-201ENST00000517400 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.86□□□□□ -1.31
LINC00534-201ENST00000517400 ALYREFQ86V81 257 aaKnown RBP6.86□□□□□ -1.31
LINC00534-201ENST00000517400 FBXO27Q8NI29 283 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 LENG1Q96BZ8 264 aaPredicted RBP6.86□□□□□ -1.31
LINC00534-201ENST00000517400 DRC1Q96MC2 740 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 WDR18Q9BV38 432 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 RNF208Q9H0X6 261 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 SUGCTQ9HAC7 445 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 PCDHGC5Q9Y5F6 944 aa6.86□□□□□ -1.31
LINC00534-201ENST00000517400 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 SELPP16109 830 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 DNAJA1P31689 397 aaKnown RBP6.85□□□□□ -1.31
LINC00534-201ENST00000517400 ZC3H12AQ5D1E8 599 aaKnown RBP6.85□□□□□ -1.31
LINC00534-201ENST00000517400 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 SHISA2Q6UWI4 295 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 ACAD11Q709F0 780 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 REC114Q7Z4M0 266 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 SMG8Q8ND04 991 aaKnown RBP6.85□□□□□ -1.31
LINC00534-201ENST00000517400 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 CYP4F12Q9HCS2 524 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 RAD18Q9NS91 495 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 PRKAG2Q9UGJ0 569 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 TACC3Q9Y6A5 838 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 RIMBP3CA6NJZ7 1639 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 RIMBP3BA6NNM3 1639 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 RIMBP3Q9UFD9 1639 aa6.85□□□□□ -1.31
LINC00534-201ENST00000517400 C9orf172C9J069 976 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
LINC00534-201ENST00000517400 RNF225M0QZC1 329 aaPredicted RBP6.84□□□□□ -1.31
LINC00534-201ENST00000517400 TLR3O15455 904 aaKnown RBP6.84□□□□□ -1.31
LINC00534-201ENST00000517400 INPP5AQ14642 412 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 SEZ6Q53EL9 994 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 LRFN4Q6PJG9 635 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 CYFIP1Q7L576 1253 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 HDXQ7Z353 690 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 REXO1Q8N1G1 1221 aaKnown RBP6.84□□□□□ -1.31
LINC00534-201ENST00000517400 NACC1Q96RE7 527 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 GINM1Q9NU53 330 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 EFR3BQ9Y2G0 817 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 CFTRP13569 1480 aa6.84□□□□□ -1.31
LINC00534-201ENST00000517400 ZNF608Q9ULD9 1512 aaPredicted RBP6.83□□□□□ -1.32
LINC00534-201ENST00000517400 FGRP09769 529 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 CDK8P49336 464 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 ZNF165P49910 485 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 ERVK-24P63145 666 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 NRG1Q02297 640 aaPredicted RBP6.83□□□□□ -1.32
LINC00534-201ENST00000517400 ID3Q02535 119 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 RING1Q06587 406 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 PLPPR2Q96GM1 343 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 AKTIPQ9H8T0 292 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 BRMS1Q9HCU9 246 aa6.83□□□□□ -1.32
LINC00534-201ENST00000517400 PRR36Q9H6K5 1346 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 ARHGEF11O15085 1522 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 TMPRSS2O15393 492 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 TIAF1O95411 115 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 APBA3O96018 575 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 NASPP49321 788 aaPredicted RBP6.82□□□□□ -1.32
LINC00534-201ENST00000517400 AKAP4Q5JQC9 854 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 WIPI1Q5MNZ9 446 aaPredicted RBP6.82□□□□□ -1.32
LINC00534-201ENST00000517400 ANKRD34AQ69YU3 496 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 MCF2L2Q86YR7 1114 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 ELMO3Q96BJ8 720 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.82□□□□□ -1.32
LINC00534-201ENST00000517400 EHMT1Q9H9B1 1298 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 CRIM1Q9NZV1 1036 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 USP21Q9UK80 565 aa6.82□□□□□ -1.32
LINC00534-201ENST00000517400 PPP1R9AQ9ULJ8 1098 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms