RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 TRPM4Q8TD43 1214 aa7.74□□□□□ -1.17
NSMCE2-202ENST00000517315 GPR152Q8TDT2 470 aa7.74□□□□□ -1.17
NSMCE2-202ENST00000517315 PIK3R5Q8WYR1 880 aa7.74□□□□□ -1.17
NSMCE2-202ENST00000517315 FAM13BQ9NYF5 915 aa7.74□□□□□ -1.17
NSMCE2-202ENST00000517315 POLKQ9UBT6 870 aa7.74□□□□□ -1.17
NSMCE2-202ENST00000517315 ZC3H6P61129 1189 aaKnown RBP7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 GPLD1P80108 840 aa7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 WDR43Q15061 677 aaKnown RBP eCLIP7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 HELQQ8TDG4 1101 aa7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 SPOCK3Q9BQ16 436 aa7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 TLR7Q9NYK1 1049 aaKnown RBP7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 NUDCQ9Y266 331 aa7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 PHRF1Q9P1Y6 1649 aaKnown RBP7.73□□□□□ -1.17
NSMCE2-202ENST00000517315 RGPD5Q99666 1765 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 COL16A1Q07092 1604 aaPredicted RBP7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 SPDYE3A6NKU9 549 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 MSTNO14793 375 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 DIAPH1O60610 1272 aaKnown RBP7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 MMP20O60882 483 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 PROCP04070 461 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 SPATA31C1P0DKV0 1188 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 NRLP54845 237 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 PHLDB3Q6NSJ2 640 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 GTF3C2Q8WUA4 911 aaPredicted RBP7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 USP19O94966 1318 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 MAP3K19Q56UN5 1328 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 SLIT3O75094 1523 aa7.72□□□□□ -1.17
NSMCE2-202ENST00000517315 MED1Q15648 1581 aaPredicted RBP7.71□□□□□ -1.17
NSMCE2-202ENST00000517315 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 U2SURPO15042 1029 aaKnown RBP7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 RGS9O75916 674 aaPredicted RBP7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 PSAPP07602 524 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 ARID4AP29374 1257 aaPredicted RBP7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 AFF1P51825 1210 aaKnown RBP7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 PERM1Q5SV97 790 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 HFE2Q6ZVN8 426 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 ARHGEF25Q86VW2 580 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 ATCAYQ86WG3 371 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 PNISRQ8TF01 805 aaKnown RBP7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 IP6K1Q92551 441 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 LPIN3Q9BQK8 851 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 USTQ9Y2C2 406 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 CRYBG1Q9Y4K1 1723 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.18
NSMCE2-202ENST00000517315 ABCA3Q99758 1704 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 PEAK1Q9H792 1746 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 NFAT5O94916 1531 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 C1QTNF9BB2RNN3 333 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 HOXC9P31274 260 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 HSPA1LP34931 641 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 CHRNA4P43681 627 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 PLAURQ03405 335 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 HSP90AB2PQ58FF8 381 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 PRRT3Q5FWE3 981 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 CD163Q86VB7 1156 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 LTV1Q96GA3 475 aaPredicted RBP7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 PRDM11Q9NQV5 511 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 FRRS1LQ9P0K9 344 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 COL22A1Q8NFW1 1626 aaPredicted RBP7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 FLT4P35916 1363 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 KIF24Q5T7B8 1368 aa7.7□□□□□ -1.18
NSMCE2-202ENST00000517315 CDK12Q9NYV4 1490 aaPredicted RBP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 U2AF1L5P0DN76 240 aaPredicted RBP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 MPSTP25325 297 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 SOX18P35713 384 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 U2AF1Q01081 240 aaKnown RBP eCLIP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 TRIM28Q13263 835 aaKnown RBP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 MTMR3Q13615 1198 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 CHRNA2Q15822 529 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 ELMSAN1Q6PJG2 1045 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 NSUN5Q96P11 429 aaKnown RBP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 FNDC3AQ9Y2H6 1198 aaKnown RBP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 SHPRHQ149N8 1683 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 INSRP06213 1382 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 KIAA0232Q92628 1395 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 JCADQ9P266 1359 aa7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
NSMCE2-202ENST00000517315 LOC102724428A0A0B4J2F2 783 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 J3QW42 95 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 NEFMP07197 916 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 HOXD8P13378 290 aaPredicted RBP7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 EIF2AK2P19525 551 aaKnown RBP7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 IL13P35225 146 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 SIK1P57059 783 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 EVA1CP58658 441 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 EIF4A2Q14240 407 aaKnown RBP7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 GRIK5Q16478 980 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 SMG9Q9H0W8 520 aaKnown RBP7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 PNNQ9H307 717 aaKnown RBP7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 RGPD2P0DJD1 1756 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 RTL1A6NKG5 1358 aa7.68□□□□□ -1.18
NSMCE2-202ENST00000517315 COL18A1P39060 1754 aa7.67□□□□□ -1.18
NSMCE2-202ENST00000517315 FAM83GA6ND36 823 aa7.67□□□□□ -1.18
NSMCE2-202ENST00000517315 EIF1AXP47813 144 aaKnown RBP7.67□□□□□ -1.18
NSMCE2-202ENST00000517315 NOM1Q5C9Z4 860 aaKnown RBP7.67□□□□□ -1.18
NSMCE2-202ENST00000517315 ANKRD24Q8TF21 1146 aa7.67□□□□□ -1.18
NSMCE2-202ENST00000517315 EDEM1Q92611 657 aa7.67□□□□□ -1.18
NSMCE2-202ENST00000517315 MTMR7Q9Y216 660 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms