RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 PRKCZQ05513 592 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SLC9C1Q4G0N8 1177 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 TREML2Q5T2D2 321 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 XAGE2Q96GT9 111 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 HMG20BQ9P0W2 317 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CEP126Q9P2H0 1117 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 RBBP6Q7Z6E9 1792 aaKnown RBP10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 A0A0G2JLL6 359 aaPredicted RBP10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 A0A1B0GUL7 405 aa10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 LDHBP07195 334 aaKnown RBP10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 IL15P40933 162 aaPredicted RBP10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MECOMQ03112 1051 aa10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 PRRT2Q7Z6L0 340 aaPredicted RBP10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 FAM163AQ96GL9 167 aaPredicted RBP10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 PRO3102Q9H379 93 aa10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 ZCCHC17Q9NP64 241 aaKnown RBP10.33□□□□□ -0.76
SCARNA20.3-201ENST00000516913 ELNP15502 786 aa10.32□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MTX1Q13505 466 aa10.32□□□□□ -0.76
SCARNA20.3-201ENST00000516913 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
SCARNA20.3-201ENST00000516913 GPR75-ASB3A0A0A6YYF3 556 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 CXCL11O14625 94 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 ENTPD3O75355 529 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 CCL5P13501 91 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 TRIM27P14373 513 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MCAMP43121 646 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 BTDP43251 543 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MNX1P50219 401 aaPredicted RBP10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 TRIM32Q13049 653 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 DCAF15Q66K64 600 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SCYL3Q8IZE3 742 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 DNAJC18Q9H819 358 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 TMOD2Q9NZR1 351 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 DENND2AQ9ULE3 1009 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MAST3O60307 1309 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 VCANP13611 3396 aa10.31□□□□□ -0.76
SCARNA20.3-201ENST00000516913 DOCK3Q8IZD9 2030 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 PICALMQ13492 652 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SLC4A8Q2Y0W8 1093 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 TMEM106CQ9BVX2 250 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 RBM27Q9P2N5 1060 aaKnown RBP10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 ABCF2Q9UG63 623 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MROH7-TTC4A0A0A0MT08 1334 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MYPNQ86TC9 1320 aa10.3□□□□□ -0.76
SCARNA20.3-201ENST00000516913 PHIPQ8WWQ0 1821 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SPTBN5Q9NRC6 3674 aaKnown RBP10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 TRIM75PA6NK02 468 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SEMA3EO15041 775 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 RLBP1P12271 317 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 GRK4P32298 578 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 FLT3LGP49771 235 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 EVX2Q03828 476 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SNRKQ9NRH2 765 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 GJD2Q9UKL4 321 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 UNC80Q8N2C7 3258 aa10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 PDS5AQ29RF7 1337 aaKnown RBP10.29□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SOX1O00570 391 aaPredicted RBP10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 GJB1P08034 283 aa10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 ARID4AP29374 1257 aaPredicted RBP10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 GJA8P48165 433 aa10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 CHRDL2Q6WN34 429 aa10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 TMEM57Q8N5G2 664 aa10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 SH3RF3Q8TEJ3 882 aaPredicted RBP10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 DIS3LQ8TF46 1054 aaKnown RBP10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 TLR7Q9NYK1 1049 aaKnown RBP10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 MYH13Q9UKX3 1938 aa10.28□□□□□ -0.76
SCARNA20.3-201ENST00000516913 EYSQ5T1H1 3165 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 CTNND1O60716 968 aaKnown RBP10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 CYP2E1P05181 493 aaPredicted RBP10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 ZEB1P37275 1124 aaPredicted RBP10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 SPP2Q13103 211 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 POLA2Q14181 598 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 GADL1Q6ZQY3 521 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 NBPF11Q86T75 865 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 ANKRD13CQ8N6S4 541 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 SPATA5Q8NB90 893 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 U2AF1L4Q8WU68 220 aaKnown RBP10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 ARHGAP45Q92619 1136 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 DBNDD2Q9BQY9 259 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 TXNRD2Q9NNW7 524 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 PIH1D3Q9NQM4 214 aaKnown RBP10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 GNL3LQ9NVN8 582 aaKnown RBP10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 SIPA1L1O43166 1804 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 MYH2Q9UKX2 1941 aa10.27□□□□□ -0.77
SCARNA20.3-201ENST00000516913 ADCY3O60266 1144 aa10.26□□□□□ -0.77
SCARNA20.3-201ENST00000516913 TBC1D12O60347 775 aa10.26□□□□□ -0.77
SCARNA20.3-201ENST00000516913 GNRH1P01148 92 aa10.26□□□□□ -0.77
SCARNA20.3-201ENST00000516913 INHAP05111 366 aa10.26□□□□□ -0.77
SCARNA20.3-201ENST00000516913 HMGCS2P54868 508 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms