RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 MXD3Q9BW11 206 aa9.01□□□□□ -0.97
SCARNA20.1-201ENST00000516009 VPS33BQ9H267 617 aa9.01□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TOMM22Q9NS69 142 aa9.01□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ARPP21Q9UBL0 812 aaPredicted RBP9.01□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
SCARNA20.1-201ENST00000516009 DAGLAQ9Y4D2 1042 aa9.01□□□□□ -0.97
SCARNA20.1-201ENST00000516009 MYH8P13535 1937 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ANTXR2P58335 489 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 APOBRQ0VD83 1088 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 STK3Q13188 491 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 RRP12Q5JTH9 1297 aaKnown RBP9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CTR9Q6PD62 1173 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 HHIPL2Q6UWX4 724 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CYB5R4Q7L1T6 521 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TEX11Q8IYF3 940 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 LARGE2Q8N3Y3 721 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TGFBRAP1Q8WUH2 860 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TEKT1Q969V4 418 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CHMP4CQ96CF2 233 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 KCNQ5Q9NR82 932 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 MCM9Q9NXL9 1143 aa9□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CYP2D7A0A087X1C5 515 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 PFKFB2O60825 505 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 KDM4AO75164 1064 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SCNN1DP51172 638 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 HDLBPQ00341 1268 aaKnown RBP8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ST3GAL1Q11201 340 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SART3Q15020 963 aaKnown RBP8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 RAB3GAP1Q15042 981 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 KIAA0825Q8IV33 1275 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 STK11IPQ8N1F8 1099 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ESR2Q92731 530 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 GTF3C6Q969F1 213 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ZNF274Q96GC6 653 aaPredicted RBP8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 MTA3Q9BTC8 594 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TAOK3Q9H2K8 898 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SPON1Q9HCB6 807 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 INCENPQ9NQS7 918 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ZNF277Q9NRM2 450 aaPredicted RBP8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 NAP1L2Q9ULW6 460 aaPredicted RBP8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ANGEL1Q9UNK9 670 aaKnown RBP8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 MYO3BQ8WXR4 1341 aa8.99□□□□□ -0.97
SCARNA20.1-201ENST00000516009 COL4A5P29400 1685 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 KLF18A0A0U1RQI7 1052 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ERICH2A1L162 156 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 YDJCA8MPS7 323 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SH2B2O14492 632 aaPredicted RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 IFIT3O14879 490 aaKnown RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ORC4O43929 436 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 POLR3DP05423 398 aaPredicted RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 FGRP09769 529 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 USP17L8P0C7I0 530 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CYP2D6P10635 497 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 GJB2P29033 226 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 PDIA3P30101 505 aaKnown RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 IARSP41252 1262 aaKnown RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CRKP46108 304 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 NT5C2P49902 561 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 EVCP57679 992 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 RHBDL3P58872 404 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 PDE4BQ07343 736 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 NFKBIBQ15653 356 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TMEM67Q5HYA8 995 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 C12orf60Q5U649 245 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 MAPKAPK5Q8IW41 473 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 NIM1KQ8IY84 436 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TNPO1Q92973 898 aaKnown RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 MRIQ9BWK5 157 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 GPHNQ9NQX3 736 aaPredicted RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ZSWIM5Q9P217 1185 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 MKRN1Q9UHC7 482 aaKnown RBP8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 BCS1LQ9Y276 419 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 TACC3Q9Y6A5 838 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ROBO3Q96MS0 1386 aa8.98□□□□□ -0.97
SCARNA20.1-201ENST00000516009 GOLGA8BA8MQT2 603 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SMIM22K7EJ46 135 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 RANBP6O60518 1105 aaKnown RBP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 LIFRP42702 1097 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 RBM5P52756 815 aaKnown RBP eCLIP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CCT2P78371 535 aaKnown RBP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SCRN1Q12765 414 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 NBR1Q14596 966 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 RSBN1LQ6PCB5 846 aaPredicted RBP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 NFXL1Q6ZNB6 911 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 IGDCC4Q8TDY8 1250 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ZDHHC15Q96MV8 337 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 GBP4Q96PP9 640 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 LLPHQ9BRT6 129 aaKnown RBP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 UBAC1Q9BSL1 405 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 USP40Q9NVE5 1235 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SAP30BPQ9UHR5 308 aaKnown RBP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 SERPINA10Q9UK55 444 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 BRPF3Q9ULD4 1205 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 ZNRF3Q9ULT6 936 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 FLT1P17948 1338 aa8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 WDR33Q9C0J8 1336 aaKnown RBP8.97□□□□□ -0.97
SCARNA20.1-201ENST00000516009 CCDC69A6NI79 296 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms