RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 ATRNL1Q5VV63 1379 aa14.33□□□□□ -0.12
SNF8-215ENST00000515572 DDX60LQ5H9U9 1706 aaKnown RBP14.32□□□□□ -0.12
SNF8-215ENST00000515572 SSC5DA1L4H1 1573 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 PPP1R12BO60237 982 aaPredicted RBP14.32□□□□□ -0.12
SNF8-215ENST00000515572 MBD4O95243 580 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 CHGBP05060 677 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 GSPT1P15170 499 aaKnown RBP14.32□□□□□ -0.12
SNF8-215ENST00000515572 USP5P45974 858 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 ZMYM1Q5SVZ6 1142 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 NBPF12Q5TAG4 269 aaPredicted RBP14.32□□□□□ -0.12
SNF8-215ENST00000515572 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
SNF8-215ENST00000515572 LCORLQ8N3X6 602 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 PUS7LQ9H0K6 701 aaKnown RBP14.32□□□□□ -0.12
SNF8-215ENST00000515572 DHX36Q9H2U1 1008 aaKnown RBP14.32□□□□□ -0.12
SNF8-215ENST00000515572 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 FLT1P17948 1338 aa14.32□□□□□ -0.12
SNF8-215ENST00000515572 GNAT2P19087 354 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 SDSP20132 328 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 DCAF15Q66K64 600 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 ARMC9Q7Z3E5 817 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 ZFPM1Q8IX07 1006 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 OSBP2Q969R2 916 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 DDRGK1Q96HY6 314 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 STRBPQ96SI9 672 aaKnown RBP14.31□□□□□ -0.12
SNF8-215ENST00000515572 HELLSQ9NRZ9 838 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
SNF8-215ENST00000515572 TLL2Q9Y6L7 1015 aa14.31□□□□□ -0.12
SNF8-215ENST00000515572 UNCXA6NJT0 531 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 TTLL12Q14166 644 aaPredicted RBP14.3□□□□□ -0.12
SNF8-215ENST00000515572 MAP3K11Q16584 847 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 SAPCD2Q86UD0 394 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 MAPKAPK5Q8IW41 473 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 HHIPL1Q96JK4 782 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 CSRNP1Q96S65 589 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
SNF8-215ENST00000515572 BAZ2AQ9UIF9 1905 aaKnown RBP14.3□□□□□ -0.12
SNF8-215ENST00000515572 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 M0R2C6 588 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 GPAA1O43292 621 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 HLA-DOAP06340 250 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 IREB2P48200 963 aaKnown RBP14.29□□□□□ -0.12
SNF8-215ENST00000515572 MCMDC2Q4G0Z9 681 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 BMP2KLQ5H9B9 411 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 SH3BP5LQ7L8J4 393 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 PI4KBQ9UBF8 816 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
SNF8-215ENST00000515572 ANGEL1Q9UNK9 670 aaKnown RBP14.29□□□□□ -0.12
SNF8-215ENST00000515572 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 SIPA1L1O43166 1804 aa14.29□□□□□ -0.12
SNF8-215ENST00000515572 DDTLA6NHG4 134 aaPredicted RBP14.28□□□□□ -0.12
SNF8-215ENST00000515572 LAMB1P07942 1786 aa14.28□□□□□ -0.12
SNF8-215ENST00000515572 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
SNF8-215ENST00000515572 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
SNF8-215ENST00000515572 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
SNF8-215ENST00000515572 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
SNF8-215ENST00000515572 ZNF341Q9BYN7 854 aa14.28□□□□□ -0.12
SNF8-215ENST00000515572 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
SNF8-215ENST00000515572 HERC5Q9UII4 1024 aaKnown RBP14.28□□□□□ -0.12
SNF8-215ENST00000515572 TAOK2Q9UL54 1235 aa14.28□□□□□ -0.12
SNF8-215ENST00000515572 RASSF10A6NK89 507 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 TBC1D12O60347 775 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 USP2O75604 605 aaPredicted RBP14.27□□□□□ -0.13
SNF8-215ENST00000515572 HUNKP57058 714 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 MAP3K10Q02779 954 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 NMIQ13287 307 aaPredicted RBP14.27□□□□□ -0.13
SNF8-215ENST00000515572 LDLRAD1Q5T700 205 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 SKAP1Q86WV1 359 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 FOXP4Q8IVH2 680 aaPredicted RBP14.27□□□□□ -0.13
SNF8-215ENST00000515572 AMOTL1Q8IY63 956 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 FAM227BQ96M60 508 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.13
SNF8-215ENST00000515572 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 SAP30BPQ9UHR5 308 aaKnown RBP14.27□□□□□ -0.13
SNF8-215ENST00000515572 PALD1Q9ULE6 856 aa14.27□□□□□ -0.13
SNF8-215ENST00000515572 MYH8P13535 1937 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 A0A0D9SFI3 127 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 PATL2C9JE40 543 aaKnown RBP14.26□□□□□ -0.13
SNF8-215ENST00000515572 UBE2Q2LH0YL09 131 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 PRKAB2O43741 272 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 PRKG1Q13976 671 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 CWC27Q6UX04 472 aaKnown RBP14.26□□□□□ -0.13
SNF8-215ENST00000515572 MOB2Q70IA6 237 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 ANKRD13AQ8IZ07 590 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 RUFY2Q8WXA3 655 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 KLRG1Q96E93 195 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 TRIM34Q9BYJ4 488 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 EHD4Q9H223 541 aa14.26□□□□□ -0.13
SNF8-215ENST00000515572 DOCK1Q14185 1865 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 CCDC171Q6TFL3 1326 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 RAD50Q92878 1312 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 APPP05067 770 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms