RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-233ENST00000515452 CAP1Q01518 475 aa9.57□□□□□ -0.88
NR1I3-233ENST00000515452 APOBEC3FQ8IUX4 373 aaKnown RBP9.57□□□□□ -0.88
NR1I3-233ENST00000515452 CLASRPQ8N2M8 674 aaKnown RBP9.57□□□□□ -0.88
NR1I3-233ENST00000515452 PTPN18Q99952 460 aa9.57□□□□□ -0.88
NR1I3-233ENST00000515452 SNRKQ9NRH2 765 aa9.57□□□□□ -0.88
NR1I3-233ENST00000515452 MTMR10Q9NXD2 777 aa9.57□□□□□ -0.88
NR1I3-233ENST00000515452 STAP2Q9UGK3 403 aa9.57□□□□□ -0.88
NR1I3-233ENST00000515452 CENPFP49454 3210 aa9.57□□□□□ -0.88
NR1I3-233ENST00000515452 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 RANBP2P49792 3224 aaKnown RBP9.56□□□□□ -0.88
NR1I3-233ENST00000515452 GJB1P08034 283 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 PRDX5P30044 214 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 FKBP1AP62942 108 aaKnown RBP9.56□□□□□ -0.88
NR1I3-233ENST00000515452 SUPT20HL1Q3ZLR7 823 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 TTC39AQ5SRH9 613 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 GORABQ5T7V8 394 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 TSHZ3Q63HK5 1081 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 TBC1D9Q6ZT07 1266 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 UBE2Q1Q7Z7E8 422 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 DENND2AQ9ULE3 1009 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 BRCA2P51587 3418 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 SALL3Q9BXA9 1300 aa9.56□□□□□ -0.88
NR1I3-233ENST00000515452 HTTP42858 3142 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 SEMA3EO15041 775 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 IFIT2P09913 472 aaKnown RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 ZAP70P43403 619 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 IREB2P48200 963 aaKnown RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 MTFR1Q15390 333 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 TAF1CQ15572 869 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 LRIT3Q3SXY7 679 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 ANKRD45Q5TZF3 282 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 B4GALNT3Q6L9W6 998 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 SPATA5Q8NB90 893 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 ZNF384Q8TF68 577 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 SHISA4Q96DD7 197 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 EDC3Q96F86 508 aaKnown RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 DEFB129Q9H1M3 183 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 RWDD1Q9H446 243 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 ANTXR1Q9H6X2 564 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 GNL3LQ9NVN8 582 aaKnown RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 TTF2Q9UNY4 1162 aaKnown RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 PDS5AQ29RF7 1337 aaKnown RBP9.55□□□□□ -0.88
NR1I3-233ENST00000515452 SALL1Q9NSC2 1324 aa9.55□□□□□ -0.88
NR1I3-233ENST00000515452 CYP2E1P05181 493 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-233ENST00000515452 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 COL9A1P20849 921 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 HOXD10P28358 340 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 CFAP100Q494V2 611 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 CCDC158Q5M9N0 1113 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 Q7L0L9 218 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 WDR66Q8TBY9 1149 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 TBC1D22AQ8WUA7 517 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 ZBED3Q96IU2 234 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-233ENST00000515452 CLMNQ96JQ2 1002 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 ZNF512BQ96KM6 892 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-233ENST00000515452 LNPKQ9C0E8 428 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 PIH1D3Q9NQM4 214 aaKnown RBP9.54□□□□□ -0.88
NR1I3-233ENST00000515452 FZD1Q9UP38 647 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 PPP2R3BQ9Y5P8 575 aa9.54□□□□□ -0.88
NR1I3-233ENST00000515452 USP2O75604 605 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-233ENST00000515452 UBXN2AP68543 259 aa9.53□□□□□ -0.88
NR1I3-233ENST00000515452 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-233ENST00000515452 DIXDC1Q155Q3 683 aa9.53□□□□□ -0.88
NR1I3-233ENST00000515452 PRMT6Q96LA8 375 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-233ENST00000515452 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
NR1I3-233ENST00000515452 GDF15Q99988 308 aa9.53□□□□□ -0.88
NR1I3-233ENST00000515452 RNF208Q9H0X6 261 aa9.53□□□□□ -0.88
NR1I3-233ENST00000515452 BOLA2Q9H3K6 86 aa9.53□□□□□ -0.88
NR1I3-233ENST00000515452 ABCF2Q9UG63 623 aa9.53□□□□□ -0.88
NR1I3-233ENST00000515452 MYH1P12882 1939 aa9.52□□□□□ -0.88
NR1I3-233ENST00000515452 SIPA1L1O43166 1804 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 OTOFQ9HC10 1997 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 TLR2O60603 784 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 ABCB7O75027 752 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 CHGBP05060 677 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 LDHBP07195 334 aaKnown RBP9.52□□□□□ -0.89
NR1I3-233ENST00000515452 ATP5JP18859 108 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 PDE4AP27815 886 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 GRK4P32298 578 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 CRKP46108 304 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 GTF2A2P52657 109 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 LACTBP83111 547 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-233ENST00000515452 NUCB1Q02818 461 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 DDX60LQ5H9U9 1706 aaKnown RBP9.52□□□□□ -0.89
NR1I3-233ENST00000515452 SKAP1Q86WV1 359 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 PI4K2BQ8TCG2 481 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 ECHDC1Q9NTX5 307 aa9.52□□□□□ -0.89
NR1I3-233ENST00000515452 NAV1Q8NEY1 1877 aa9.51□□□□□ -0.89
NR1I3-233ENST00000515452 BAZ2AQ9UIF9 1905 aaKnown RBP9.51□□□□□ -0.89
NR1I3-233ENST00000515452 CLRN2A0PK11 232 aa9.51□□□□□ -0.89
NR1I3-233ENST00000515452 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
NR1I3-233ENST00000515452 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-233ENST00000515452 SGPL1O95470 568 aa9.51□□□□□ -0.89
NR1I3-233ENST00000515452 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
NR1I3-233ENST00000515452 CCL5P13501 91 aa9.51□□□□□ -0.89
NR1I3-233ENST00000515452 GJA5P36382 358 aa9.51□□□□□ -0.89
NR1I3-233ENST00000515452 MECOMQ03112 1051 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms