RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 MAPKAPK5Q8IW41 473 aa20.02■□□□□ 0.8
AP3S1-208ENST00000515066 TDRD3Q9H7E2 651 aaKnown RBP20.02■□□□□ 0.8
AP3S1-208ENST00000515066 GPRC5DQ9NZD1 345 aa20.02■□□□□ 0.8
AP3S1-208ENST00000515066 MYH8P13535 1937 aa20.02■□□□□ 0.79
AP3S1-208ENST00000515066 WNT10BO00744 389 aa20.01■□□□□ 0.79
AP3S1-208ENST00000515066 USP5P45974 858 aa20.01■□□□□ 0.79
AP3S1-208ENST00000515066 IMMTQ16891 758 aaKnown RBP20.01■□□□□ 0.79
AP3S1-208ENST00000515066 SCN4AP35499 1836 aa20.01■□□□□ 0.79
AP3S1-208ENST00000515066 CYP2D7A0A087X1C5 515 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 USP17L12C9JPN9 530 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 USP17L21D6R901 530 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 ZKSCAN1P17029 563 aaPredicted RBP20■□□□□ 0.79
AP3S1-208ENST00000515066 CACNB3P54284 484 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 SAMD7Q7Z3H4 446 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 TBC1D10CQ8IV04 446 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 IDI2Q9BXS1 227 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 NBPF9Q3BBW0 867 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 MCM9Q9NXL9 1143 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 FAM198AQ9UFP1 575 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 TACC3Q9Y6A5 838 aa20■□□□□ 0.79
AP3S1-208ENST00000515066 ZNF213O14771 459 aa19.99■□□□□ 0.79
AP3S1-208ENST00000515066 SBK1Q52WX2 424 aa19.99■□□□□ 0.79
AP3S1-208ENST00000515066 ARPP21Q9UBL0 812 aaPredicted RBP19.99■□□□□ 0.79
AP3S1-208ENST00000515066 ANAPC4Q9UJX5 808 aa19.99■□□□□ 0.79
AP3S1-208ENST00000515066 WDR90Q96KV7 1748 aa19.98■□□□□ 0.79
AP3S1-208ENST00000515066 CYP2D6P10635 497 aa19.98■□□□□ 0.79
AP3S1-208ENST00000515066 EPS15P42566 896 aa19.98■□□□□ 0.79
AP3S1-208ENST00000515066 PPARAQ07869 468 aa19.98■□□□□ 0.79
AP3S1-208ENST00000515066 PICALMQ13492 652 aa19.98■□□□□ 0.79
AP3S1-208ENST00000515066 DDRGK1Q96HY6 314 aa19.98■□□□□ 0.79
AP3S1-208ENST00000515066 L3MBTL3Q96JM7 780 aaPredicted RBP19.98■□□□□ 0.79
AP3S1-208ENST00000515066 ZNF70Q9UC06 446 aaPredicted RBP19.98■□□□□ 0.79
AP3S1-208ENST00000515066 ROBO3Q96MS0 1386 aa19.98■□□□□ 0.79
AP3S1-208ENST00000515066 CLRN2A0PK11 232 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 E7EWF7 191 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 NPM3O75607 178 aaKnown RBP19.97■□□□□ 0.79
AP3S1-208ENST00000515066 CTDSPL2Q05D32 466 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 TBC1D10BQ4KMP7 808 aaPredicted RBP19.97■□□□□ 0.79
AP3S1-208ENST00000515066 C12orf60Q5U649 245 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 TRPM4Q8TD43 1214 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 OSBPL5Q9H0X9 879 aaPredicted RBP19.97■□□□□ 0.79
AP3S1-208ENST00000515066 SAP30BPQ9UHR5 308 aaKnown RBP19.97■□□□□ 0.79
AP3S1-208ENST00000515066 GLTPD2A6NH11 291 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 MINDY4BA8MYZ0 360 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 H7C1D1 291 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 SLC4A8Q2Y0W8 1093 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 RBM26Q5T8P6 1007 aaKnown RBP19.97■□□□□ 0.79
AP3S1-208ENST00000515066 ZFPM1Q8IX07 1006 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 NKX2-3Q8TAU0 364 aa19.97■□□□□ 0.79
AP3S1-208ENST00000515066 JAKMIP1Q96N16 626 aaKnown RBP19.97■□□□□ 0.79
AP3S1-208ENST00000515066 UPF3BQ9BZI7 483 aaKnown RBP19.97■□□□□ 0.79
AP3S1-208ENST00000515066 PLCD1P51178 756 aa19.96■□□□□ 0.79
AP3S1-208ENST00000515066 KRT32Q14532 448 aa19.96■□□□□ 0.79
AP3S1-208ENST00000515066 DPY19L2Q6NUT2 758 aa19.96■□□□□ 0.79
AP3S1-208ENST00000515066 TM6SF1Q9BZW5 370 aa19.96■□□□□ 0.79
AP3S1-208ENST00000515066 COL2A1P02458 1487 aaPredicted RBP19.96■□□□□ 0.79
AP3S1-208ENST00000515066 CNTNAP1P78357 1384 aa19.95■□□□□ 0.78
AP3S1-208ENST00000515066 ASTN2O75129 1339 aaPredicted RBP19.95■□□□□ 0.78
AP3S1-208ENST00000515066 NEDD4P46934 1319 aa19.95■□□□□ 0.78
AP3S1-208ENST00000515066 RABEP1Q15276 862 aa19.95■□□□□ 0.78
AP3S1-208ENST00000515066 STAG1Q8WVM7 1258 aa19.95■□□□□ 0.78
AP3S1-208ENST00000515066 ZSWIM6Q9HCJ5 1215 aa19.95■□□□□ 0.78
AP3S1-208ENST00000515066 INCENPQ9NQS7 918 aa19.95■□□□□ 0.78
AP3S1-208ENST00000515066 ATRNL1Q5VV63 1379 aa19.95■□□□□ 0.78
AP3S1-208ENST00000515066 CPA1P15085 419 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 CASTP20810 708 aaKnown RBP19.94■□□□□ 0.78
AP3S1-208ENST00000515066 TCP10Q12799 353 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 AKNAD1Q5T1N1 836 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 FKBP1CQ5VVH2 108 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 SH3BP5LQ7L8J4 393 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 MYO1BO43795 1136 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 ENTPD3O75355 529 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 FGRP09769 529 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 HIRAP54198 1017 aaPredicted RBP19.94■□□□□ 0.78
AP3S1-208ENST00000515066 NEK1Q96PY6 1258 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 TMOD2Q9NZR1 351 aa19.94■□□□□ 0.78
AP3S1-208ENST00000515066 DDTLA6NHG4 134 aaPredicted RBP19.93■□□□□ 0.78
AP3S1-208ENST00000515066 TCP10L2B9ZVM9 353 aa19.93■□□□□ 0.78
AP3S1-208ENST00000515066 CD2BP2O95400 341 aaKnown RBP19.93■□□□□ 0.78
AP3S1-208ENST00000515066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.93■□□□□ 0.78
AP3S1-208ENST00000515066 POLR3DP05423 398 aaPredicted RBP19.92■□□□□ 0.78
AP3S1-208ENST00000515066 PSMA5P28066 241 aa19.92■□□□□ 0.78
AP3S1-208ENST00000515066 LMOD1P29536 600 aaPredicted RBP19.92■□□□□ 0.78
AP3S1-208ENST00000515066 RUFY3Q7L099 469 aa19.92■□□□□ 0.78
AP3S1-208ENST00000515066 MB21D2Q8IYB1 491 aaPredicted RBP19.92■□□□□ 0.78
AP3S1-208ENST00000515066 STK11IPQ8N1F8 1099 aa19.92■□□□□ 0.78
AP3S1-208ENST00000515066 DYNLL2Q96FJ2 89 aa19.92■□□□□ 0.78
AP3S1-208ENST00000515066 TTC14Q96N46 770 aa19.92■□□□□ 0.78
AP3S1-208ENST00000515066 VEZTQ9HBM0 779 aa19.92■□□□□ 0.78
AP3S1-208ENST00000515066 ADARB2Q9NS39 739 aaKnown RBP19.92■□□□□ 0.78
AP3S1-208ENST00000515066 NEK4P51957 841 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 GABPAQ06546 454 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 MFSD6Q6ZSS7 791 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 POTECB2RU33 542 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 RPS6KB1P23443 525 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 BLOC1S2Q6QNY1 142 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 FAM83AQ86UY5 434 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 AMOTL1Q8IY63 956 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms