RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 CPSF6Q16630 551 aaKnown RBP eCLIP8.13□□□□□ -1.11
PHF3-211ENST00000514822 INTS5Q6P9B9 1019 aaKnown RBP8.13□□□□□ -1.11
PHF3-211ENST00000514822 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
PHF3-211ENST00000514822 ZAR1Q86SH2 424 aa8.13□□□□□ -1.11
PHF3-211ENST00000514822 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
PHF3-211ENST00000514822 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
PHF3-211ENST00000514822 HYAL3O43820 417 aaPredicted RBP8.12□□□□□ -1.11
PHF3-211ENST00000514822 SORBS3O60504 671 aa8.12□□□□□ -1.11
PHF3-211ENST00000514822 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
PHF3-211ENST00000514822 SSTR4P31391 388 aa8.12□□□□□ -1.11
PHF3-211ENST00000514822 MEI1Q5TIA1 1274 aa8.12□□□□□ -1.11
PHF3-211ENST00000514822 TTBK2Q6IQ55 1244 aa8.12□□□□□ -1.11
PHF3-211ENST00000514822 SMYD4Q8IYR2 804 aaPredicted RBP8.12□□□□□ -1.11
PHF3-211ENST00000514822 PCMTD2Q9NV79 361 aa8.12□□□□□ -1.11
PHF3-211ENST00000514822 PCDHA4Q9UN74 947 aa8.12□□□□□ -1.11
PHF3-211ENST00000514822 LEMD3Q9Y2U8 911 aa8.12□□□□□ -1.11
PHF3-211ENST00000514822 LMNB1P20700 586 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 ADMP35318 185 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 CD97P48960 835 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 TAGLNQ01995 201 aaKnown RBP8.11□□□□□ -1.11
PHF3-211ENST00000514822 TAF1CQ15572 869 aaPredicted RBP8.11□□□□□ -1.11
PHF3-211ENST00000514822 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 SEZ6L2Q6UXD5 910 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 RNF214Q8ND24 703 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 BCL2L13Q9BXK5 485 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 PIM2Q9P1W9 311 aa8.11□□□□□ -1.11
PHF3-211ENST00000514822 DYNC1LI2O43237 492 aaPredicted RBP8.1□□□□□ -1.11
PHF3-211ENST00000514822 ST13P50502 369 aaKnown RBP8.1□□□□□ -1.11
PHF3-211ENST00000514822 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
PHF3-211ENST00000514822 CYP27A1Q02318 531 aa8.1□□□□□ -1.11
PHF3-211ENST00000514822 SHISA5Q8N114 240 aa8.1□□□□□ -1.11
PHF3-211ENST00000514822 GATA6Q92908 595 aa8.1□□□□□ -1.11
PHF3-211ENST00000514822 CRELD1Q96HD1 420 aa8.1□□□□□ -1.11
PHF3-211ENST00000514822 SSU72Q9NP77 194 aaKnown RBP8.1□□□□□ -1.11
PHF3-211ENST00000514822 PICK1Q9NRD5 415 aa8.1□□□□□ -1.11
PHF3-211ENST00000514822 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
PHF3-211ENST00000514822 PCOLCE2Q9UKZ9 415 aa8.1□□□□□ -1.11
PHF3-211ENST00000514822 DCDC2CA8MYV0 355 aa8.09□□□□□ -1.11
PHF3-211ENST00000514822 CTSHP09668 335 aa8.09□□□□□ -1.11
PHF3-211ENST00000514822 ZNF326Q5BKZ1 582 aaKnown RBP8.09□□□□□ -1.11
PHF3-211ENST00000514822 DUSP27Q5VZP5 1158 aa8.09□□□□□ -1.11
PHF3-211ENST00000514822 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
PHF3-211ENST00000514822 ELMO3Q96BJ8 720 aa8.09□□□□□ -1.11
PHF3-211ENST00000514822 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
PHF3-211ENST00000514822 FAM170BA6NMN3 283 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 NEFMP07197 916 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 RLBP1P12271 317 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 LIG3P49916 1009 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 PPM1JQ5JR12 505 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 XP32Q5T750 250 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 NOC4LQ9BVI4 516 aaKnown RBP8.08□□□□□ -1.12
PHF3-211ENST00000514822 BCL11AQ9H165 835 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 CSADQ9Y600 493 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 USP31Q70CQ4 1352 aa8.08□□□□□ -1.12
PHF3-211ENST00000514822 KIAA1324LA8MWY0 1029 aaPredicted RBP8.07□□□□□ -1.12
PHF3-211ENST00000514822 CYP26A1O43174 497 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 MED26O95402 600 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 FOSL1P15407 271 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 MAP3K11Q16584 847 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 OGFOD3Q6PK18 319 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 C12orf40Q86WS4 652 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.07□□□□□ -1.12
PHF3-211ENST00000514822 GIPC2Q8TF65 315 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 GAL3ST3Q96A11 431 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 ISL2Q96A47 359 aa8.07□□□□□ -1.12
PHF3-211ENST00000514822 FANCGO15287 622 aa8.06□□□□□ -1.12
PHF3-211ENST00000514822 CYP27C1Q4G0S4 372 aa8.06□□□□□ -1.12
PHF3-211ENST00000514822 AGMOQ6ZNB7 445 aa8.06□□□□□ -1.12
PHF3-211ENST00000514822 ZNF765Q7L2R6 523 aa8.06□□□□□ -1.12
PHF3-211ENST00000514822 SPINK2P20155 84 aa8.05□□□□□ -1.12
PHF3-211ENST00000514822 HOXA10P31260 410 aaPredicted RBP8.05□□□□□ -1.12
PHF3-211ENST00000514822 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
PHF3-211ENST00000514822 RING1Q06587 406 aa8.05□□□□□ -1.12
PHF3-211ENST00000514822 CDK5R2Q13319 367 aa8.05□□□□□ -1.12
PHF3-211ENST00000514822 HDXQ7Z353 690 aa8.05□□□□□ -1.12
PHF3-211ENST00000514822 MIR1-1HGQ9H1L0 117 aa8.05□□□□□ -1.12
PHF3-211ENST00000514822 PCDHB5Q9Y5E4 795 aa8.05□□□□□ -1.12
PHF3-211ENST00000514822 SNCAIPQ9Y6H5 919 aa8.05□□□□□ -1.12
PHF3-211ENST00000514822 FAM87AP0C7U9 286 aa8.04□□□□□ -1.12
PHF3-211ENST00000514822 MFAP1P55081 439 aaKnown RBP8.04□□□□□ -1.12
PHF3-211ENST00000514822 INPP5AQ14642 412 aa8.04□□□□□ -1.12
PHF3-211ENST00000514822 ZBTB37Q5TC79 503 aa8.04□□□□□ -1.12
PHF3-211ENST00000514822 LRFN4Q6PJG9 635 aa8.04□□□□□ -1.12
PHF3-211ENST00000514822 CDC37L1Q7L3B6 337 aa8.04□□□□□ -1.12
PHF3-211ENST00000514822 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
PHF3-211ENST00000514822 KCT2Q8NC54 265 aa8.04□□□□□ -1.12
PHF3-211ENST00000514822 PRAMEF27A3QJZ7 478 aa8.03□□□□□ -1.12
PHF3-211ENST00000514822 NTF4P34130 210 aa8.03□□□□□ -1.12
PHF3-211ENST00000514822 SEPT6Q14141 434 aa8.03□□□□□ -1.12
PHF3-211ENST00000514822 WIPI1Q5MNZ9 446 aaPredicted RBP8.03□□□□□ -1.12
PHF3-211ENST00000514822 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.03□□□□□ -1.12
PHF3-211ENST00000514822 PLPPR2Q96GM1 343 aa8.03□□□□□ -1.12
PHF3-211ENST00000514822 LRRC4CQ9HCJ2 640 aa8.03□□□□□ -1.12
PHF3-211ENST00000514822 TFE3P19532 575 aaPredicted RBP8.02□□□□□ -1.13
PHF3-211ENST00000514822 MSMPQ1L6U9 139 aa8.02□□□□□ -1.13
PHF3-211ENST00000514822 DIEXFQ68CQ4 756 aaKnown RBP8.02□□□□□ -1.13
PHF3-211ENST00000514822 CYFIP1Q7L576 1253 aa8.02□□□□□ -1.13
PHF3-211ENST00000514822 ZNF507Q8TCN5 953 aa8.02□□□□□ -1.13
PHF3-211ENST00000514822 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms