RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 PTPRAP18433 802 aa16.43■□□□□ 0.22
SMAD5-209ENST00000514777 PRDX5P30044 214 aa16.43■□□□□ 0.22
SMAD5-209ENST00000514777 RFX5P48382 616 aaPredicted RBP16.43■□□□□ 0.22
SMAD5-209ENST00000514777 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
SMAD5-209ENST00000514777 DEFB118Q96PH6 123 aa16.43■□□□□ 0.22
SMAD5-209ENST00000514777 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
SMAD5-209ENST00000514777 PAK6Q9NQU5 681 aaPredicted RBP16.43■□□□□ 0.22
SMAD5-209ENST00000514777 USP40Q9NVE5 1235 aa16.43■□□□□ 0.22
SMAD5-209ENST00000514777 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
SMAD5-209ENST00000514777 MAP3K10Q02779 954 aa16.42■□□□□ 0.22
SMAD5-209ENST00000514777 IRF5Q13568 498 aa16.42■□□□□ 0.22
SMAD5-209ENST00000514777 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
SMAD5-209ENST00000514777 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
SMAD5-209ENST00000514777 PAWRQ96IZ0 340 aaKnown RBP16.42■□□□□ 0.22
SMAD5-209ENST00000514777 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
SMAD5-209ENST00000514777 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
SMAD5-209ENST00000514777 LPIN2Q92539 896 aa16.41■□□□□ 0.22
SMAD5-209ENST00000514777 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
SMAD5-209ENST00000514777 DOCK1Q14185 1865 aa16.41■□□□□ 0.22
SMAD5-209ENST00000514777 EYA2O00167 538 aa16.4■□□□□ 0.22
SMAD5-209ENST00000514777 SLC5A1P13866 664 aa16.4■□□□□ 0.22
SMAD5-209ENST00000514777 GADL1Q6ZQY3 521 aa16.4■□□□□ 0.22
SMAD5-209ENST00000514777 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
SMAD5-209ENST00000514777 DIS3LQ8TF46 1054 aaKnown RBP16.4■□□□□ 0.22
SMAD5-209ENST00000514777 GDF15Q99988 308 aa16.4■□□□□ 0.22
SMAD5-209ENST00000514777 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.21
SMAD5-209ENST00000514777 LDHBP07195 334 aaKnown RBP16.39■□□□□ 0.21
SMAD5-209ENST00000514777 CAPN2P17655 700 aa16.39■□□□□ 0.21
SMAD5-209ENST00000514777 BMP8BP34820 402 aa16.39■□□□□ 0.21
SMAD5-209ENST00000514777 RGS3P49796 1198 aa16.39■□□□□ 0.21
SMAD5-209ENST00000514777 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
SMAD5-209ENST00000514777 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.39■□□□□ 0.21
SMAD5-209ENST00000514777 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
SMAD5-209ENST00000514777 DDTLA6NHG4 134 aaPredicted RBP16.38■□□□□ 0.21
SMAD5-209ENST00000514777 ENTPD3O75355 529 aa16.38■□□□□ 0.21
SMAD5-209ENST00000514777 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
SMAD5-209ENST00000514777 CCDC84Q86UT8 332 aaPredicted RBP16.38■□□□□ 0.21
SMAD5-209ENST00000514777 PICK1Q9NRD5 415 aa16.38■□□□□ 0.21
SMAD5-209ENST00000514777 SALL1Q9NSC2 1324 aa16.38■□□□□ 0.21
SMAD5-209ENST00000514777 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
SMAD5-209ENST00000514777 MNX1P50219 401 aaPredicted RBP16.37■□□□□ 0.21
SMAD5-209ENST00000514777 NECAB2Q7Z6G3 386 aa16.37■□□□□ 0.21
SMAD5-209ENST00000514777 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
SMAD5-209ENST00000514777 DDX4Q9NQI0 724 aaKnown RBP16.37■□□□□ 0.21
SMAD5-209ENST00000514777 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
SMAD5-209ENST00000514777 PHKA1P46020 1223 aa16.36■□□□□ 0.21
SMAD5-209ENST00000514777 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
SMAD5-209ENST00000514777 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMAD5-209ENST00000514777 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
SMAD5-209ENST00000514777 GJD2Q9UKL4 321 aa16.36■□□□□ 0.21
SMAD5-209ENST00000514777 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
SMAD5-209ENST00000514777 AGTPBP1Q9UPW5 1226 aa16.36■□□□□ 0.21
SMAD5-209ENST00000514777 GAKO14976 1311 aa16.36■□□□□ 0.21
SMAD5-209ENST00000514777 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
SMAD5-209ENST00000514777 TRIM32Q13049 653 aa16.35■□□□□ 0.21
SMAD5-209ENST00000514777 GPR153Q6NV75 609 aa16.35■□□□□ 0.21
SMAD5-209ENST00000514777 Q7L0L9 218 aa16.35■□□□□ 0.21
SMAD5-209ENST00000514777 C7orf61Q8IZ16 206 aa16.35■□□□□ 0.21
SMAD5-209ENST00000514777 SMCR8Q8TEV9 937 aaPredicted RBP16.35■□□□□ 0.21
SMAD5-209ENST00000514777 COA7Q96BR5 231 aa16.35■□□□□ 0.21
SMAD5-209ENST00000514777 ZMYND8Q9ULU4 1186 aaPredicted RBP16.35■□□□□ 0.21
SMAD5-209ENST00000514777 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
SMAD5-209ENST00000514777 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
SMAD5-209ENST00000514777 ATAD5Q96QE3 1844 aa16.35■□□□□ 0.21
SMAD5-209ENST00000514777 LOC285556D6RIA3 1793 aa16.34■□□□□ 0.21
SMAD5-209ENST00000514777 CUL9Q8IWT3 2517 aa16.34■□□□□ 0.21
SMAD5-209ENST00000514777 ZBTB22O15209 634 aa16.34■□□□□ 0.21
SMAD5-209ENST00000514777 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
SMAD5-209ENST00000514777 ZSCAN29Q8IWY8 852 aaPredicted RBP16.34■□□□□ 0.21
SMAD5-209ENST00000514777 ANKLE1Q8NAG6 615 aa16.34■□□□□ 0.21
SMAD5-209ENST00000514777 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
SMAD5-209ENST00000514777 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
SMAD5-209ENST00000514777 FAM110CQ1W6H9 321 aa16.33■□□□□ 0.2
SMAD5-209ENST00000514777 DEFB123Q8N688 67 aa16.33■□□□□ 0.2
SMAD5-209ENST00000514777 SIL1Q9H173 461 aa16.33■□□□□ 0.2
SMAD5-209ENST00000514777 SEMA3EO15041 775 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 CIAO1O76071 339 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 PTPRCP08575 1304 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 SYN1P17600 705 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 ADORA1P30542 326 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 LRIT3Q3SXY7 679 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 RPTORQ8N122 1335 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 ZNF384Q8TF68 577 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
SMAD5-209ENST00000514777 MTMR10Q9NXD2 777 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 CEP126Q9P2H0 1117 aa16.32■□□□□ 0.2
SMAD5-209ENST00000514777 UNC80Q8N2C7 3258 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 ZNF521Q96K83 1311 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 FAM196BA6NMK8 535 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 TBC1D12O60347 775 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 HMGCRP04035 888 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 MAGEA10P43363 369 aaPredicted RBP16.31■□□□□ 0.2
SMAD5-209ENST00000514777 RHBDL3P58872 404 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 PICALMQ13492 652 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 RRP1BQ14684 758 aaKnown RBP16.31■□□□□ 0.2
SMAD5-209ENST00000514777 CCDC102BQ68D86 513 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
SMAD5-209ENST00000514777 SSH1Q8WYL5 1049 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 NBPF3Q9H094 633 aa16.31■□□□□ 0.2
SMAD5-209ENST00000514777 HMX1Q9NP08 348 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms