RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 RLBP1P12271 317 aa10.39□□□□□ -0.75
TRAPPC11-210ENST00000513600 NOC4LQ9BVI4 516 aaKnown RBP10.39□□□□□ -0.75
TRAPPC11-210ENST00000513600 ATG3Q9NT62 314 aa10.39□□□□□ -0.75
TRAPPC11-210ENST00000513600 DAGLAQ9Y4D2 1042 aa10.39□□□□□ -0.75
TRAPPC11-210ENST00000513600 WDR64B1ANS9 1081 aa10.38□□□□□ -0.75
TRAPPC11-210ENST00000513600 TTLL4Q14679 1199 aa10.38□□□□□ -0.75
TRAPPC11-210ENST00000513600 SMYD4Q8IYR2 804 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC11-210ENST00000513600 TBC1D32Q96NH3 1257 aa10.38□□□□□ -0.75
TRAPPC11-210ENST00000513600 PCDHA4Q9UN74 947 aa10.38□□□□□ -0.75
TRAPPC11-210ENST00000513600 LMNB1P20700 586 aa10.37□□□□□ -0.75
TRAPPC11-210ENST00000513600 LRP8Q14114 963 aa10.37□□□□□ -0.75
TRAPPC11-210ENST00000513600 CPSF6Q16630 551 aaKnown RBP eCLIP10.37□□□□□ -0.75
TRAPPC11-210ENST00000513600 SEZ6L2Q6UXD5 910 aa10.37□□□□□ -0.75
TRAPPC11-210ENST00000513600 ZAR1Q86SH2 424 aa10.37□□□□□ -0.75
TRAPPC11-210ENST00000513600 FBXL6Q8N531 539 aa10.37□□□□□ -0.75
TRAPPC11-210ENST00000513600 RNF214Q8ND24 703 aa10.37□□□□□ -0.75
TRAPPC11-210ENST00000513600 PRR19A6NJB7 356 aa10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 RNGTTO60942 597 aaKnown RBP10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 TGFB1P01137 390 aa10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 F13BP05160 661 aa10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 LIG3P49916 1009 aa10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 TRIM26Q12899 539 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 ARTNQ5T4W7 220 aa10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 Q8N3U1 123 aa10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 PCOLCE2Q9UKZ9 415 aa10.36□□□□□ -0.75
TRAPPC11-210ENST00000513600 COBLO75128 1261 aa10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 HCLS1P14317 486 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 GRIK1P39086 918 aa10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 MAP3K11Q16584 847 aa10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 INTS5Q6P9B9 1019 aaKnown RBP10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 AGMOQ6ZNB7 445 aa10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 METTL22Q9BUU2 404 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 OSBPL1AQ9BXW6 950 aa10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 C1GALT1Q9NS00 363 aa10.35□□□□□ -0.75
TRAPPC11-210ENST00000513600 LOC100996750A0A140TA64 210 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 DCDC2CA8MYV0 355 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 ADMP35318 185 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 GATA6Q92908 595 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 GAL3ST3Q96A11 431 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 ELMO3Q96BJ8 720 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 KRTAP4-6Q9BYQ5 205 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 SSU72Q9NP77 194 aaKnown RBP10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 PICK1Q9NRD5 415 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 LEMD3Q9Y2U8 911 aa10.34□□□□□ -0.75
TRAPPC11-210ENST00000513600 DYNC1LI2O43237 492 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC11-210ENST00000513600 NEFMP07197 916 aa10.33□□□□□ -0.76
TRAPPC11-210ENST00000513600 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
TRAPPC11-210ENST00000513600 RING1Q06587 406 aa10.33□□□□□ -0.76
TRAPPC11-210ENST00000513600 ZFP64Q9NPA5 681 aa10.33□□□□□ -0.76
TRAPPC11-210ENST00000513600 PIM2Q9P1W9 311 aa10.33□□□□□ -0.76
TRAPPC11-210ENST00000513600 CSADQ9Y600 493 aa10.33□□□□□ -0.76
TRAPPC11-210ENST00000513600 FANCGO15287 622 aa10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 HYAL3O43820 417 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 CD97P48960 835 aa10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 PTPN11Q06124 597 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 PPM1JQ5JR12 505 aa10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 DUSP27Q5VZP5 1158 aa10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 HDXQ7Z353 690 aa10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 C12orf40Q86WS4 652 aa10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 ISL2Q96A47 359 aa10.32□□□□□ -0.76
TRAPPC11-210ENST00000513600 ZNF16P17020 682 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 SSTR4P31391 388 aa10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 LRFN4Q6PJG9 635 aa10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 SHISA5Q8N114 240 aa10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 MIR1-1HGQ9H1L0 117 aa10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 PCDHB5Q9Y5E4 795 aa10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 SNCAIPQ9Y6H5 919 aa10.31□□□□□ -0.76
TRAPPC11-210ENST00000513600 FAM170BA6NMN3 283 aa10.3□□□□□ -0.76
TRAPPC11-210ENST00000513600 TFE3P19532 575 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC11-210ENST00000513600 MRPL58Q14197 206 aaKnown RBP10.3□□□□□ -0.76
TRAPPC11-210ENST00000513600 INPP5AQ14642 412 aa10.3□□□□□ -0.76
TRAPPC11-210ENST00000513600 ZBTB37Q5TC79 503 aa10.3□□□□□ -0.76
TRAPPC11-210ENST00000513600 DIEXFQ68CQ4 756 aaKnown RBP10.3□□□□□ -0.76
TRAPPC11-210ENST00000513600 OGFOD3Q6PK18 319 aa10.3□□□□□ -0.76
TRAPPC11-210ENST00000513600 SEPT6Q14141 434 aa10.29□□□□□ -0.76
TRAPPC11-210ENST00000513600 CYFIP1Q7L576 1253 aa10.29□□□□□ -0.76
TRAPPC11-210ENST00000513600 KCT2Q8NC54 265 aa10.29□□□□□ -0.76
TRAPPC11-210ENST00000513600 PLPPR2Q96GM1 343 aa10.29□□□□□ -0.76
TRAPPC11-210ENST00000513600 PCMTD2Q9NV79 361 aa10.29□□□□□ -0.76
TRAPPC11-210ENST00000513600 FOSL1P15407 271 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 CDK5R2Q13319 367 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 PWP1Q13610 501 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 CDC37L1Q7L3B6 337 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 RELL1Q8IUW5 271 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 PHC3Q8NDX5 983 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 ZNF507Q8TCN5 953 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 RSRP1Q9BUV0 290 aa10.28□□□□□ -0.76
TRAPPC11-210ENST00000513600 KIAA1324LA8MWY0 1029 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 MED26O95402 600 aa10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 NTF4P34130 210 aa10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 TSNAXIP1Q2TAA8 658 aa10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 CYP27C1Q4G0S4 372 aa10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 WIPI1Q5MNZ9 446 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 ZNF765Q7L2R6 523 aa10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 TLR6Q9Y2C9 796 aa10.27□□□□□ -0.77
TRAPPC11-210ENST00000513600 PRAMEF27A3QJZ7 478 aa10.26□□□□□ -0.77
TRAPPC11-210ENST00000513600 CYP26A1O43174 497 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms