RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 GJB1P08034 283 aa12.04□□□□□ -0.48
TCOF1-212ENST00000513538 GJA8P48165 433 aa12.04□□□□□ -0.48
TCOF1-212ENST00000513538 PRRT2Q7Z6L0 340 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-212ENST00000513538 CCDC84Q86UT8 332 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-212ENST00000513538 SCYL3Q8IZE3 742 aa12.04□□□□□ -0.48
TCOF1-212ENST00000513538 IDI2Q9BXS1 227 aa12.04□□□□□ -0.48
TCOF1-212ENST00000513538 PRO3102Q9H379 93 aa12.04□□□□□ -0.48
TCOF1-212ENST00000513538 DDX4Q9NQI0 724 aaKnown RBP12.04□□□□□ -0.48
TCOF1-212ENST00000513538 LOC285556D6RIA3 1793 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 DDTLA6NHG4 134 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-212ENST00000513538 CIAO1O76071 339 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 PTPRAP18433 802 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 HOXD10P28358 340 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 SLFN5Q08AF3 891 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 RNF208Q9H0X6 261 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
TCOF1-212ENST00000513538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-212ENST00000513538 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
TCOF1-212ENST00000513538 SIPA1L1O43166 1804 aa12.02□□□□□ -0.48
TCOF1-212ENST00000513538 SZT2Q5T011 3432 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 E9PSI1 815 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 ENTPD3O75355 529 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 ELNP15502 786 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 FCGRTP55899 365 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 MAP3K10Q02779 954 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 RASGRF1Q13972 1273 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 CCDC102BQ68D86 513 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 ZNF384Q8TF68 577 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 U2AF1L4Q8WU68 220 aaKnown RBP12.02□□□□□ -0.49
TCOF1-212ENST00000513538 DPF3Q92784 378 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 CEP126Q9P2H0 1117 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 DENND2AQ9ULE3 1009 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 AFG3L2Q9Y4W6 797 aa12.02□□□□□ -0.49
TCOF1-212ENST00000513538 RANBP2P49792 3224 aaKnown RBP12.01□□□□□ -0.49
TCOF1-212ENST00000513538 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 SEMA3EO15041 775 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 ZBTB22O15209 634 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-212ENST00000513538 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-212ENST00000513538 FLT3LGP49771 235 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 ALDH1L2Q3SY69 923 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 GADL1Q6ZQY3 521 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 SLAIN1Q8ND83 568 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
TCOF1-212ENST00000513538 BIN2Q9UBW5 565 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-212ENST00000513538 PLXNB2O15031 1838 aa12.01□□□□□ -0.49
TCOF1-212ENST00000513538 CDK5RAP2Q96SN8 1893 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 INHAP05111 366 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 IL15P40933 162 aaPredicted RBP12□□□□□ -0.49
TCOF1-212ENST00000513538 BTDP43251 543 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 RHBDL3P58872 404 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 UBXN2AP68543 259 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 TREML2Q5T2D2 321 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 FASTKD5Q7L8L6 764 aaKnown RBP12□□□□□ -0.49
TCOF1-212ENST00000513538 MEIS3Q99687 375 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 PICK1Q9NRD5 415 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 SLC45A1Q9Y2W3 748 aa12□□□□□ -0.49
TCOF1-212ENST00000513538 TRIM75PA6NK02 468 aa11.99□□□□□ -0.49
TCOF1-212ENST00000513538 ZBTB7BO15156 539 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 ADCY3O60266 1144 aa11.99□□□□□ -0.49
TCOF1-212ENST00000513538 SGPL1O95470 568 aa11.99□□□□□ -0.49
TCOF1-212ENST00000513538 TIMM10P62072 90 aa11.99□□□□□ -0.49
TCOF1-212ENST00000513538 PICALMQ13492 652 aa11.99□□□□□ -0.49
TCOF1-212ENST00000513538 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 ZSCAN29Q8IWY8 852 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 FAM163AQ96GL9 167 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
TCOF1-212ENST00000513538 NOB1Q9ULX3 412 aaKnown RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 MROH7-TTC4A0A0A0MT08 1334 aa11.99□□□□□ -0.49
TCOF1-212ENST00000513538 PDS5AQ29RF7 1337 aaKnown RBP11.99□□□□□ -0.49
TCOF1-212ENST00000513538 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
TCOF1-212ENST00000513538 TNPO2O14787 897 aaKnown RBP11.98□□□□□ -0.49
TCOF1-212ENST00000513538 CTNND1O60716 968 aaKnown RBP11.98□□□□□ -0.49
TCOF1-212ENST00000513538 MECOMQ03112 1051 aa11.98□□□□□ -0.49
TCOF1-212ENST00000513538 PI16Q6UXB8 463 aa11.98□□□□□ -0.49
TCOF1-212ENST00000513538 ANKRD13CQ8N6S4 541 aa11.98□□□□□ -0.49
TCOF1-212ENST00000513538 DEFB118Q96PH6 123 aa11.98□□□□□ -0.49
TCOF1-212ENST00000513538 HTATIP2Q9BUP3 242 aa11.98□□□□□ -0.49
TCOF1-212ENST00000513538 PAK6Q9NQU5 681 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-212ENST00000513538 AGTPBP1Q9UPW5 1226 aa11.98□□□□□ -0.49
TCOF1-212ENST00000513538 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
TCOF1-212ENST00000513538 DDX60LQ5H9U9 1706 aaKnown RBP11.97□□□□□ -0.49
TCOF1-212ENST00000513538 GPR75-ASB3A0A0A6YYF3 556 aa11.97□□□□□ -0.49
TCOF1-212ENST00000513538 SOX1O00570 391 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-212ENST00000513538 TFCP2Q12800 502 aa11.97□□□□□ -0.49
TCOF1-212ENST00000513538 IRF5Q13568 498 aa11.97□□□□□ -0.49
TCOF1-212ENST00000513538 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
TCOF1-212ENST00000513538 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
TCOF1-212ENST00000513538 SMCR8Q8TEV9 937 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-212ENST00000513538 DIS3LQ8TF46 1054 aaKnown RBP11.97□□□□□ -0.49
TCOF1-212ENST00000513538 XAGE2Q96GT9 111 aa11.97□□□□□ -0.49
TCOF1-212ENST00000513538 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms