RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 APOBEC3HQ6NTF7 200 aaKnown RBP12.17□□□□□ -0.46
CCL28-203ENST00000513525 CTU1Q7Z7A3 348 aaKnown RBP12.17□□□□□ -0.46
CCL28-203ENST00000513525 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
CCL28-203ENST00000513525 TMOD2Q9NZR1 351 aa12.17□□□□□ -0.46
CCL28-203ENST00000513525 FOCADQ5VW36 1801 aa12.17□□□□□ -0.46
CCL28-203ENST00000513525 CCDC85CA6NKD9 419 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 SRGAP3O43295 1099 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 RGS19P49795 217 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 ZNF296Q8WUU4 475 aaPredicted RBP12.16□□□□□ -0.46
CCL28-203ENST00000513525 FRAT1Q92837 279 aaPredicted RBP12.16□□□□□ -0.46
CCL28-203ENST00000513525 DENND2AQ9ULE3 1009 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 TNNQ9UQP3 1299 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 PDS5AQ29RF7 1337 aaKnown RBP12.16□□□□□ -0.46
CCL28-203ENST00000513525 RBBP6Q7Z6E9 1792 aaKnown RBP12.16□□□□□ -0.46
CCL28-203ENST00000513525 PHIPQ8WWQ0 1821 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 ATAD5Q96QE3 1844 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 GPR25O00155 361 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 GNAI2P04899 355 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 PRDX5P30044 214 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 GJA5P36382 358 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 PHKA1P46020 1223 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 CCDC102BQ68D86 513 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.16□□□□□ -0.46
CCL28-203ENST00000513525 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCL28-203ENST00000513525 HOOK2Q96ED9 719 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
CCL28-203ENST00000513525 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
CCL28-203ENST00000513525 LDHBP07195 334 aaKnown RBP12.15□□□□□ -0.46
CCL28-203ENST00000513525 CACNB3P54284 484 aa12.15□□□□□ -0.46
CCL28-203ENST00000513525 PKN2Q16513 984 aaKnown RBP12.15□□□□□ -0.46
CCL28-203ENST00000513525 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
CCL28-203ENST00000513525 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
CCL28-203ENST00000513525 DAGLAQ9Y4D2 1042 aa12.15□□□□□ -0.46
CCL28-203ENST00000513525 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
CCL28-203ENST00000513525 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 IGF2BP3O00425 579 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCL28-203ENST00000513525 ADORA1P30542 326 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 TFCP2Q12800 502 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 AAMPQ13685 434 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 VGLL4Q14135 290 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 C20orf194Q5TEA3 1177 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 OPTNQ96CV9 577 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 ELP3Q9H9T3 547 aa12.14□□□□□ -0.47
CCL28-203ENST00000513525 MGAMO43451 1857 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 FKTNO75072 461 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 TIMM10P62072 90 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 RASGRF1Q13972 1273 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 MVPQ14764 893 aaKnown RBP12.13□□□□□ -0.47
CCL28-203ENST00000513525 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 OTUD7BQ6GQQ9 843 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 TMEM92Q6UXU6 159 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 FAM151AQ8WW52 585 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 XAGE2Q96GT9 111 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 R3HDMLQ9H3Y0 253 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 CSADQ9Y600 493 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 HTTP42858 3142 aa12.13□□□□□ -0.47
CCL28-203ENST00000513525 GAKO14976 1311 aa12.12□□□□□ -0.47
CCL28-203ENST00000513525 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
CCL28-203ENST00000513525 DCAF15Q66K64 600 aa12.12□□□□□ -0.47
CCL28-203ENST00000513525 CDC42EP5Q6NZY7 148 aa12.12□□□□□ -0.47
CCL28-203ENST00000513525 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
CCL28-203ENST00000513525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
CCL28-203ENST00000513525 PDE4DIPQ5VU43 2346 aa12.12□□□□□ -0.47
CCL28-203ENST00000513525 CENPFP49454 3210 aa12.12□□□□□ -0.47
CCL28-203ENST00000513525 RFX7Q2KHR2 1363 aa12.12□□□□□ -0.47
CCL28-203ENST00000513525 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 PTPN18Q99952 460 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 SNCAIPQ9Y6H5 919 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 ZSWIM8A7E2V4 1837 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 MS4A1P11836 297 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 GTF2A2P52657 109 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 G3BP1Q13283 466 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCL28-203ENST00000513525 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
CCL28-203ENST00000513525 ERO1BQ86YB8 467 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 ZNF341Q9BYN7 854 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
CCL28-203ENST00000513525 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 MYH1P12882 1939 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 ARID4AP29374 1257 aaPredicted RBP12.1□□□□□ -0.47
CCL28-203ENST00000513525 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
CCL28-203ENST00000513525 NFIAQ12857 509 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 CRHR2Q13324 411 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 FBXO46Q6PJ61 603 aaPredicted RBP12.1□□□□□ -0.47
CCL28-203ENST00000513525 FTSJ3Q8IY81 847 aaKnown RBP12.1□□□□□ -0.47
CCL28-203ENST00000513525 BRI3BPQ8WY22 251 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 NEUROD6Q96NK8 337 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 IDI2Q9BXS1 227 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 GPR108Q9NPR9 543 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms