RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ZSCAN29Q8IWY8 852 aaPredicted RBP25.28■■□□□ 1.64
NEIL3-202ENST00000513321 FAM227BQ96M60 508 aa25.28■■□□□ 1.64
NEIL3-202ENST00000513321 OSBPL5Q9H0X9 879 aaPredicted RBP25.28■■□□□ 1.64
NEIL3-202ENST00000513321 GTF3C3Q9Y5Q9 886 aa25.28■■□□□ 1.64
NEIL3-202ENST00000513321 PRKAB2O43741 272 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 NF2P35240 595 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 APLP1P51693 650 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 NMIQ13287 307 aaPredicted RBP25.27■■□□□ 1.64
NEIL3-202ENST00000513321 SH3BP5LQ7L8J4 393 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 HELLSQ9NRZ9 838 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 FLT1P17948 1338 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 HIP1O00291 1037 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 GPAA1O43292 621 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 BMP2KLQ5H9B9 411 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 SDR42E1Q8WUS8 393 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 DIAPH3Q9NSV4 1193 aa25.27■■□□□ 1.64
NEIL3-202ENST00000513321 A0A0D9SFI3 127 aa25.26■■□□□ 1.63
NEIL3-202ENST00000513321 DDTLA6NHG4 134 aaPredicted RBP25.26■■□□□ 1.63
NEIL3-202ENST00000513321 TMEM88BA6NKF7 163 aa25.26■■□□□ 1.63
NEIL3-202ENST00000513321 SLC4A4Q9Y6R1 1079 aa25.26■■□□□ 1.63
NEIL3-202ENST00000513321 RPAP1Q9BWH6 1393 aaPredicted RBP25.25■■□□□ 1.63
NEIL3-202ENST00000513321 MCMDC2Q4G0Z9 681 aa25.25■■□□□ 1.63
NEIL3-202ENST00000513321 GBA2Q9HCG7 927 aaPredicted RBP25.25■■□□□ 1.63
NEIL3-202ENST00000513321 SAP30BPQ9UHR5 308 aaKnown RBP25.25■■□□□ 1.63
NEIL3-202ENST00000513321 PRKG1Q13976 671 aa25.24■■□□□ 1.63
NEIL3-202ENST00000513321 CWC27Q6UX04 472 aaKnown RBP25.24■■□□□ 1.63
NEIL3-202ENST00000513321 CCDC129Q6ZRS4 1044 aa25.24■■□□□ 1.63
NEIL3-202ENST00000513321 C2orf69Q8N8R5 385 aa25.24■■□□□ 1.63
NEIL3-202ENST00000513321 CSRNP1Q96S65 589 aa25.24■■□□□ 1.63
NEIL3-202ENST00000513321 MKRN1Q9UHC7 482 aaKnown RBP25.24■■□□□ 1.63
NEIL3-202ENST00000513321 HOOK2Q96ED9 719 aa25.23■■□□□ 1.63
NEIL3-202ENST00000513321 DCP1AQ9NPI6 582 aaPredicted RBP25.23■■□□□ 1.63
NEIL3-202ENST00000513321 ATP8A2Q9NTI2 1148 aa25.23■■□□□ 1.63
NEIL3-202ENST00000513321 PALD1Q9ULE6 856 aa25.23■■□□□ 1.63
NEIL3-202ENST00000513321 FZD1Q9UP38 647 aa25.23■■□□□ 1.63
NEIL3-202ENST00000513321 HSPA6P17066 643 aa25.22■■□□□ 1.63
NEIL3-202ENST00000513321 GNAT2P19087 354 aa25.22■■□□□ 1.63
NEIL3-202ENST00000513321 TTLL12Q14166 644 aaPredicted RBP25.22■■□□□ 1.63
NEIL3-202ENST00000513321 DHX36Q9H2U1 1008 aaKnown RBP25.22■■□□□ 1.63
NEIL3-202ENST00000513321 ATRNL1Q5VV63 1379 aa25.22■■□□□ 1.63
NEIL3-202ENST00000513321 SSC5DA1L4H1 1573 aa25.22■■□□□ 1.63
NEIL3-202ENST00000513321 PPP1R12BO60237 982 aaPredicted RBP25.22■■□□□ 1.63
NEIL3-202ENST00000513321 CHMLP26374 656 aa25.22■■□□□ 1.63
NEIL3-202ENST00000513321 MOB2Q70IA6 237 aa25.22■■□□□ 1.63
NEIL3-202ENST00000513321 MIGA2Q7L4E1 593 aa25.22■■□□□ 1.63
NEIL3-202ENST00000513321 GSG1L2A8MUP6 293 aa25.21■■□□□ 1.63
NEIL3-202ENST00000513321 FKBP1BP68106 108 aa25.21■■□□□ 1.63
NEIL3-202ENST00000513321 CREBZFQ9NS37 354 aa25.21■■□□□ 1.63
NEIL3-202ENST00000513321 MCM9Q9NXL9 1143 aa25.21■■□□□ 1.63
NEIL3-202ENST00000513321 AK9Q5TCS8 1911 aa25.2■■□□□ 1.62
NEIL3-202ENST00000513321 COL2A1P02458 1487 aaPredicted RBP25.2■■□□□ 1.62
NEIL3-202ENST00000513321 PATL2C9JE40 543 aaKnown RBP25.2■■□□□ 1.62
NEIL3-202ENST00000513321 USP2O75604 605 aaPredicted RBP25.2■■□□□ 1.62
NEIL3-202ENST00000513321 APPP05067 770 aa25.2■■□□□ 1.62
NEIL3-202ENST00000513321 SLC4A8Q2Y0W8 1093 aa25.2■■□□□ 1.62
NEIL3-202ENST00000513321 DDRGK1Q96HY6 314 aa25.2■■□□□ 1.62
NEIL3-202ENST00000513321 PI4KBQ9UBF8 816 aa25.2■■□□□ 1.62
NEIL3-202ENST00000513321 ANGEL1Q9UNK9 670 aaKnown RBP25.2■■□□□ 1.62
NEIL3-202ENST00000513321 TRPM7Q96QT4 1865 aa25.2■■□□□ 1.62
NEIL3-202ENST00000513321 UBE2Q2LH0YL09 131 aa25.19■■□□□ 1.62
NEIL3-202ENST00000513321 DCAF15Q66K64 600 aa25.19■■□□□ 1.62
NEIL3-202ENST00000513321 ARMC9Q7Z3E5 817 aa25.19■■□□□ 1.62
NEIL3-202ENST00000513321 ZNF589Q86UQ0 364 aaPredicted RBP25.19■■□□□ 1.62
NEIL3-202ENST00000513321 ABT1Q9ULW3 272 aaKnown RBP25.19■■□□□ 1.62
NEIL3-202ENST00000513321 CDK5RAP2Q96SN8 1893 aa25.19■■□□□ 1.62
NEIL3-202ENST00000513321 POLR3DP05423 398 aaPredicted RBP25.18■■□□□ 1.62
NEIL3-202ENST00000513321 SLURP2P0DP57 97 aa25.18■■□□□ 1.62
NEIL3-202ENST00000513321 SAPCD2Q86UD0 394 aa25.18■■□□□ 1.62
NEIL3-202ENST00000513321 TLL2Q9Y6L7 1015 aa25.18■■□□□ 1.62
NEIL3-202ENST00000513321 HLA-DOAP06340 250 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 HTRA3P83110 453 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 GIMAP6Q6P9H5 292 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 TTC6Q86TZ1 520 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 CCDC171Q6TFL3 1326 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 FOCADQ5VW36 1801 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 USP17L12C9JPN9 530 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 USP17L21D6R901 530 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 PLCD1P51178 756 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 MFAP1P55081 439 aaKnown RBP25.17■■□□□ 1.62
NEIL3-202ENST00000513321 HUNKP57058 714 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 MAP3K10Q02779 954 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 MAP3K11Q16584 847 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 VPS53Q5VIR6 699 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 FOXP4Q8IVH2 680 aaPredicted RBP25.17■■□□□ 1.62
NEIL3-202ENST00000513321 IFNL3Q8IZI9 196 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 RUFY2Q8WXA3 655 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 ZNF341Q9BYN7 854 aa25.17■■□□□ 1.62
NEIL3-202ENST00000513321 TBC1D12O60347 775 aa25.16■■□□□ 1.62
NEIL3-202ENST00000513321 IREB2P48200 963 aaKnown RBP25.16■■□□□ 1.62
NEIL3-202ENST00000513321 NACAP1Q9BZK3 213 aa25.16■■□□□ 1.62
NEIL3-202ENST00000513321 EPB41L4AQ9HCS5 686 aaPredicted RBP25.16■■□□□ 1.62
NEIL3-202ENST00000513321 FOXP2O15409 715 aa25.15■■□□□ 1.62
NEIL3-202ENST00000513321 CYP2D6P10635 497 aa25.15■■□□□ 1.62
NEIL3-202ENST00000513321 LDLRAD1Q5T700 205 aa25.15■■□□□ 1.62
NEIL3-202ENST00000513321 CTR9Q6PD62 1173 aa25.15■■□□□ 1.62
NEIL3-202ENST00000513321 KLRG1Q96E93 195 aa25.15■■□□□ 1.62
NEIL3-202ENST00000513321 IL25Q9H293 177 aa25.15■■□□□ 1.62
NEIL3-202ENST00000513321 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.15■■□□□ 1.62
NEIL3-202ENST00000513321 FAM196BA6NMK8 535 aa25.14■■□□□ 1.62
NEIL3-202ENST00000513321 TDO2P48775 406 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms