RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 NMRK2Q9NPI5 230 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 OTOFQ9HC10 1997 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 WNT10BO00744 389 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 MYO1BO43795 1136 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 PDE6AP16499 860 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 UBE3CQ15386 1083 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 TBC1D10BQ4KMP7 808 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 BMP2KLQ5H9B9 411 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 SLC9C2Q5TAH2 1124 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 SAMD7Q7Z3H4 446 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 CERS3Q8IU89 383 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 TRPM4Q8TD43 1214 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 ZNF384Q8TF68 577 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 RILPL2Q969X0 211 aa9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 ZBED3Q96IU2 234 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 NOL10Q9BSC4 688 aaKnown RBP9.16□□□□□ -0.94
HMGXB3-204ENST00000513318 PITPNM2Q9BZ72 1349 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 ZNF532Q9HCE3 1301 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 GPR75-ASB3A0A0A6YYF3 556 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 TCRBV5S4A2TA0A5A2 114 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 HIP1O00291 1037 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 BAG3O95817 575 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 EGFRP00533 1210 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 SDSP20132 328 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 CYP7A1P22680 504 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 BTDP43251 543 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 APPBP2Q92624 585 aa9.15□□□□□ -0.94
HMGXB3-204ENST00000513318 RNF113AO15541 343 aaKnown RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 HIRAP54198 1017 aaPredicted RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 NBPF9Q3BBW0 867 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 APOBEC3HQ6NTF7 200 aaKnown RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 TMEM92Q6UXU6 159 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 ADGRA1Q86SQ6 560 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 LDHDQ86WU2 507 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 OTUD5Q96G74 571 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 PRMT6Q96LA8 375 aaPredicted RBP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 AATFQ9NY61 560 aaKnown RBP eCLIP9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 TMOD2Q9NZR1 351 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 PCDHAC2Q9Y5I4 1007 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 PAPPA2Q9BXP8 1791 aa9.14□□□□□ -0.95
HMGXB3-204ENST00000513318 DOCK1Q14185 1865 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 MAGEB6P1A0A0J9YX57 407 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 PPP4CP60510 307 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 TNFAIP1Q13829 316 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 ZMYM1Q5SVZ6 1142 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 APOBEC3FQ8IUX4 373 aaKnown RBP9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 TDRD3Q9H7E2 651 aaKnown RBP9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 DIAPH3Q9NSV4 1193 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 GGA3Q9NZ52 723 aa9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 COL2A1P02458 1487 aaPredicted RBP9.13□□□□□ -0.95
HMGXB3-204ENST00000513318 RPAP1Q9BWH6 1393 aaPredicted RBP9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 RAD50Q92878 1312 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 MYH4Q9Y623 1939 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 CLRN2A0PK11 232 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 KIF3CO14782 793 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 TNNI2P48788 182 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 ANGEL2Q5VTE6 544 aaKnown RBP9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 FKBP1CQ5VVH2 108 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 CDC42EP5Q6NZY7 148 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 MIGA1Q8NAN2 632 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 AIDAQ96BJ3 306 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 DCPSQ96C86 337 aaKnown RBP9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 RIOK1Q9BRS2 568 aaKnown RBP9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 PUS7LQ9H0K6 701 aaKnown RBP9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 VEZTQ9HBM0 779 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 HELLSQ9NRZ9 838 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 USP40Q9NVE5 1235 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 ZNF70Q9UC06 446 aaPredicted RBP9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 PGAP2Q9UHJ9 254 aa9.12□□□□□ -0.95
HMGXB3-204ENST00000513318 PTPRFP10586 1907 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 A0A0D9SFI3 127 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 GPAA1O43292 621 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 MBD4O95243 580 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 CHGBP05060 677 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 RHBDL3P58872 404 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 DYNLL1P63167 89 aaKnown RBP9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 NMIQ13287 307 aaPredicted RBP9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 FAM83AQ86UY5 434 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 SULF1Q8IWU6 871 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 LCORLQ8N3X6 602 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 SH3RF3Q8TEJ3 882 aaPredicted RBP9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 RUFY2Q8WXA3 655 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 FAM227BQ96M60 508 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 IDI2Q9BXS1 227 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 CRNKL1Q9BZJ0 848 aaKnown RBP9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 PPP2R3BQ9Y5P8 575 aa9.11□□□□□ -0.95
HMGXB3-204ENST00000513318 ASTN2O75129 1339 aaPredicted RBP9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 CCDC171Q6TFL3 1326 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms