RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 ELMO3Q96BJ8 720 aa4.04□□□□□ -1.76
SMN1-208ENST00000513228 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
SMN1-208ENST00000513228 SRCIN1Q9C0H9 1055 aa4.04□□□□□ -1.76
SMN1-208ENST00000513228 NRSN2Q9GZP1 204 aa4.04□□□□□ -1.76
SMN1-208ENST00000513228 OAS3Q9Y6K5 1087 aaKnown RBP4.04□□□□□ -1.76
SMN1-208ENST00000513228 PRR19A6NJB7 356 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 IGHA2P01877 340 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 P4HBP07237 508 aaKnown RBP4.03□□□□□ -1.76
SMN1-208ENST00000513228 USP17L7P0C7H9 530 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 FAM87AP0C7U9 286 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 FOSL1P15407 271 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 NME2P22392 152 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 EIF4BP23588 611 aaKnown RBP4.03□□□□□ -1.76
SMN1-208ENST00000513228 ADMP35318 185 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 XPCQ01831 940 aaPredicted RBP4.03□□□□□ -1.76
SMN1-208ENST00000513228 LRRC14Q15048 493 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 EAPPQ56P03 285 aaPredicted RBP4.03□□□□□ -1.76
SMN1-208ENST00000513228 DIEXFQ68CQ4 756 aaKnown RBP4.03□□□□□ -1.76
SMN1-208ENST00000513228 LLGL2Q6P1M3 1020 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 FANCD2OSQ96PS1 177 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 FAM8A1Q9UBU6 413 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 PCDHA4Q9UN74 947 aa4.03□□□□□ -1.76
SMN1-208ENST00000513228 PRAMEF27A3QJZ7 478 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 ANKRD33BA6NCL7 494 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 DCDC2CA8MYV0 355 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 GIPC1O14908 333 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 TMPRSS2O15393 492 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 DYNC1LI2O43237 492 aaPredicted RBP4.02□□□□□ -1.77
SMN1-208ENST00000513228 ZNF862O60290 1169 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 FGD1P98174 961 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 FMR1Q06787 632 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMN1-208ENST00000513228 MAP3K11Q16584 847 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 SHISA5Q8N114 240 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 FLCNQ8NFG4 579 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 STK35Q8TDR2 534 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 GPBAR1Q8TDU6 330 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 EZH1Q92800 747 aaPredicted RBP4.02□□□□□ -1.77
SMN1-208ENST00000513228 OSBPL7Q9BZF2 842 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 ACSS3Q9H6R3 686 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 C12orf49Q9H741 205 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 KRT82Q9NSB4 513 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 CRIM1Q9NZV1 1036 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 PCOLCE2Q9UKZ9 415 aa4.02□□□□□ -1.77
SMN1-208ENST00000513228 ITIH2P19823 946 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 PSMD2Q13200 908 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 CCDC85BQ15834 202 aaPredicted RBP4.01□□□□□ -1.77
SMN1-208ENST00000513228 CPSF6Q16630 551 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMN1-208ENST00000513228 KIF4BQ2VIQ3 1234 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 PPM1JQ5JR12 505 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 SND1Q7KZF4 910 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMN1-208ENST00000513228 C12orf40Q86WS4 652 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 GRIN3AQ8TCU5 1115 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 NECAB3Q96P71 396 aaPredicted RBP4.01□□□□□ -1.77
SMN1-208ENST00000513228 MRS2Q9HD23 443 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 PPM1HQ9ULR3 514 aa4.01□□□□□ -1.77
SMN1-208ENST00000513228 PRPF40AO75400 957 aaKnown RBP4□□□□□ -1.77
SMN1-208ENST00000513228 PAGE1O75459 146 aa4□□□□□ -1.77
SMN1-208ENST00000513228 CELA3AP09093 270 aa4□□□□□ -1.77
SMN1-208ENST00000513228 ETF1P62495 437 aaKnown RBP4□□□□□ -1.77
SMN1-208ENST00000513228 PCNX4Q63HM2 1172 aa4□□□□□ -1.77
SMN1-208ENST00000513228 OGFOD2Q6N063 350 aa4□□□□□ -1.77
SMN1-208ENST00000513228 OGFOD3Q6PK18 319 aa4□□□□□ -1.77
SMN1-208ENST00000513228 MPRIPQ6WCQ1 1025 aa4□□□□□ -1.77
SMN1-208ENST00000513228 SPOCD1Q6ZMY3 1216 aa4□□□□□ -1.77
SMN1-208ENST00000513228 DTX1Q86Y01 620 aa4□□□□□ -1.77
SMN1-208ENST00000513228 TOP6BLQ8N6T0 577 aa4□□□□□ -1.77
SMN1-208ENST00000513228 FAM181AQ8N9Y4 354 aa4□□□□□ -1.77
SMN1-208ENST00000513228 ISL2Q96A47 359 aa4□□□□□ -1.77
SMN1-208ENST00000513228 FBXL18Q96ME1 805 aa4□□□□□ -1.77
SMN1-208ENST00000513228 DUSP9Q99956 384 aaKnown RBP4□□□□□ -1.77
SMN1-208ENST00000513228 DISC1Q9NRI5 854 aa4□□□□□ -1.77
SMN1-208ENST00000513228 BSDC1Q9NW68 430 aaPredicted RBP4□□□□□ -1.77
SMN1-208ENST00000513228 KIAA1324LA8MWY0 1029 aaPredicted RBP3.99□□□□□ -1.77
SMN1-208ENST00000513228 ENC1O14682 589 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 GNA15P30679 374 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 PLCL1Q15111 1095 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 TTBK2Q6IQ55 1244 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 HDXQ7Z353 690 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 PDZD3Q86UT5 571 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 VSIG10LQ86VR7 867 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 C3orf58Q8NDZ4 430 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 FRMD6Q96NE9 622 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 GZF1Q9H116 711 aaPredicted RBP3.99□□□□□ -1.77
SMN1-208ENST00000513228 BCL11AQ9H165 835 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 ZC3H7BQ9UGR2 993 aaKnown RBP3.99□□□□□ -1.77
SMN1-208ENST00000513228 CYP8B1Q9UNU6 501 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 SLC5A6Q9Y289 635 aa3.99□□□□□ -1.77
SMN1-208ENST00000513228 GNAT3A8MTJ3 354 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 LEFTY1O75610 366 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 TRIM37O94972 964 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 SPINK2P20155 84 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 ERVK-24P63145 666 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 ZC3H12AQ5D1E8 599 aaKnown RBP3.98□□□□□ -1.77
SMN1-208ENST00000513228 RNF214Q8ND24 703 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 AGBL5Q8NDL9 886 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 JARID2Q92833 1246 aaPredicted RBP3.98□□□□□ -1.77
SMN1-208ENST00000513228 C1GALT1Q9NS00 363 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 VTI1BQ9UEU0 232 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 CCDC39Q9UFE4 941 aa3.98□□□□□ -1.77
SMN1-208ENST00000513228 TPX2Q9ULW0 747 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms