RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CTSWP56202 376 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 HUNKP57058 714 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 IL16Q14005 1332 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 QPCTQ16769 361 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 TWISTNBQ3B726 338 aaPredicted RBP9.18□□□□□ -0.94
USP46-208ENST00000512656 PODNQ7Z5L7 613 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 AGBL3Q8NEM8 1001 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 HELBQ8NG08 1087 aaPredicted RBP9.18□□□□□ -0.94
USP46-208ENST00000512656 CCDC85AQ96PX6 553 aaPredicted RBP9.18□□□□□ -0.94
USP46-208ENST00000512656 CDK15Q96Q40 435 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 TAF1P21675 1872 aa9.17□□□□□ -0.94
USP46-208ENST00000512656 RTL9Q8NET4 1388 aa9.17□□□□□ -0.94
USP46-208ENST00000512656 CAPN5O15484 640 aaPredicted RBP9.17□□□□□ -0.94
USP46-208ENST00000512656 KIF4BQ2VIQ3 1234 aa9.17□□□□□ -0.94
USP46-208ENST00000512656 WWC1Q8IX03 1113 aa9.17□□□□□ -0.94
USP46-208ENST00000512656 TSPYL6Q8N831 410 aa9.17□□□□□ -0.94
USP46-208ENST00000512656 JARID2Q92833 1246 aaPredicted RBP9.17□□□□□ -0.94
USP46-208ENST00000512656 TSR2Q969E8 191 aaKnown RBP9.17□□□□□ -0.94
USP46-208ENST00000512656 GBA2Q9HCG7 927 aaPredicted RBP9.17□□□□□ -0.94
USP46-208ENST00000512656 KCNQ5Q9NR82 932 aa9.17□□□□□ -0.94
USP46-208ENST00000512656 BSDC1Q9NW68 430 aaPredicted RBP9.17□□□□□ -0.94
USP46-208ENST00000512656 MAP10Q9P2G4 905 aa9.17□□□□□ -0.94
USP46-208ENST00000512656 THSD7BQ9C0I4 1608 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 USP17L3A6NCW0 530 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 USP17L4A6NCW7 530 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 NEURL1BA8MQ27 555 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 IGKV5-2P06315 115 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
USP46-208ENST00000512656 IGHMBP2P38935 993 aaKnown RBP9.16□□□□□ -0.94
USP46-208ENST00000512656 ZNF280AP59817 542 aaPredicted RBP9.16□□□□□ -0.94
USP46-208ENST00000512656 USP17L1Q7RTZ2 530 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 BPHLQ86WA6 291 aaPredicted RBP9.16□□□□□ -0.94
USP46-208ENST00000512656 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 MYH16Q9H6N6 1097 aa9.16□□□□□ -0.94
USP46-208ENST00000512656 ZNF609O15014 1411 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 H7C1W4 665 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 ANP32CO43423 234 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 WFS1O76024 890 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
USP46-208ENST00000512656 MMP14P50281 582 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 CWF19L2Q2TBE0 894 aaKnown RBP9.15□□□□□ -0.94
USP46-208ENST00000512656 RGMBQ6NW40 437 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 UBE3BQ7Z3V4 1068 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 ABHD8Q96I13 439 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 ANKRD2Q9GZV1 360 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 MRS2Q9HD23 443 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 GGA3Q9NZ52 723 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 MINPP1Q9UNW1 487 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 LEMD3Q9Y2U8 911 aa9.15□□□□□ -0.94
USP46-208ENST00000512656 MED23Q9ULK4 1368 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 MYO3BQ8WXR4 1341 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 PITPNM2Q9BZ72 1349 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 ADM5C9JUS6 153 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 ADH1CP00326 375 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 EGFRP00533 1210 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 CCT4P50991 539 aaKnown RBP9.14□□□□□ -0.95
USP46-208ENST00000512656 ZNF157P51786 506 aaPredicted RBP9.14□□□□□ -0.95
USP46-208ENST00000512656 FLIIQ13045 1269 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 NNTQ13423 1086 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
USP46-208ENST00000512656 SCARF1Q14162 830 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 GCKRQ14397 625 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 WDR63Q8IWG1 891 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 GPKOWQ92917 476 aaPredicted RBP eCLIP9.14□□□□□ -0.95
USP46-208ENST00000512656 GMLQ99445 158 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 MPHOSPH8Q99549 860 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 PLA2G12BQ9BX93 195 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 COA1Q9GZY4 146 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 GREM2Q9H772 168 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 MYOZ2Q9NPC6 264 aa9.14□□□□□ -0.95
USP46-208ENST00000512656 COL4A1P02462 1669 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 KCNJ4P48050 445 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 FKBP1BP68106 108 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 NFX1Q12986 1120 aaKnown RBP9.13□□□□□ -0.95
USP46-208ENST00000512656 CCDC184Q52MB2 194 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 STRIP1Q5VSL9 837 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 ANGEL2Q5VTE6 544 aaKnown RBP9.13□□□□□ -0.95
USP46-208ENST00000512656 G2E3Q7L622 706 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 LINS1Q8NG48 757 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 DNAAF4Q8WXU2 420 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 TSC1Q92574 1164 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 CDCA5Q96FF9 252 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 DDRGK1Q96HY6 314 aa9.13□□□□□ -0.95
USP46-208ENST00000512656 FANCIQ9NVI1 1328 aa9.12□□□□□ -0.95
USP46-208ENST00000512656 ITGA6P23229 1130 aa9.12□□□□□ -0.95
USP46-208ENST00000512656 NF2P35240 595 aa9.12□□□□□ -0.95
USP46-208ENST00000512656 NR5A1Q13285 461 aa9.12□□□□□ -0.95
USP46-208ENST00000512656 DLK2Q6UY11 383 aa9.12□□□□□ -0.95
USP46-208ENST00000512656 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
USP46-208ENST00000512656 SAGE1Q9NXZ1 904 aa9.12□□□□□ -0.95
USP46-208ENST00000512656 ZNF804BA4D1E1 1349 aa9.11□□□□□ -0.95
USP46-208ENST00000512656 ANKRD18BA2A2Z9 1011 aa9.11□□□□□ -0.95
USP46-208ENST00000512656 CCDC85CA6NKD9 419 aa9.11□□□□□ -0.95
USP46-208ENST00000512656 FAM155AB1AL88 458 aaPredicted RBP9.11□□□□□ -0.95
USP46-208ENST00000512656 TERTO14746 1132 aaKnown RBP9.11□□□□□ -0.95
USP46-208ENST00000512656 VAMP4O75379 141 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms