RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 MCOLN1Q9GZU1 580 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 GPR108Q9NPR9 543 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 ZNF609O15014 1411 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 GOLGA6L3A6NEY3 463 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 RAD21O60216 631 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 CD46P15529 392 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 HUNKP57058 714 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 KRT32Q14532 448 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 CSPP1Q1MSJ5 1256 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 TSHZ3Q63HK5 1081 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 CWC27Q6UX04 472 aaKnown RBP11.3□□□□□ -0.6
MSH3-203ENST00000512531 CLEC17AQ6ZS10 378 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
MSH3-203ENST00000512531 HMG20BQ9P0W2 317 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 AKAP2Q9Y2D5 859 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 ATP6V1DQ9Y5K8 247 aa11.3□□□□□ -0.6
MSH3-203ENST00000512531 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 H7C1W4 665 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 PSMD14O00487 310 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 CIAO1O76071 339 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
MSH3-203ENST00000512531 ATP5JP18859 108 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 KRT26Q7Z3Y9 468 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 USP48Q86UV5 1035 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
MSH3-203ENST00000512531 SH2B1Q9NRF2 756 aaPredicted RBP11.29□□□□□ -0.6
MSH3-203ENST00000512531 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 NSFL1CQ9UNZ2 370 aaKnown RBP11.29□□□□□ -0.6
MSH3-203ENST00000512531 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
MSH3-203ENST00000512531 CYP46A1Q9Y6A2 500 aa11.29□□□□□ -0.6
MSH3-203ENST00000512531 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 FAM155AB1AL88 458 aaPredicted RBP11.28□□□□□ -0.6
MSH3-203ENST00000512531 SPTLC1O15269 473 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 VIL1P09327 827 aaKnown RBP11.28□□□□□ -0.6
MSH3-203ENST00000512531 RPS8P62241 208 aaKnown RBP11.28□□□□□ -0.6
MSH3-203ENST00000512531 QPCTQ16769 361 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
MSH3-203ENST00000512531 DCPSQ96C86 337 aaKnown RBP11.28□□□□□ -0.6
MSH3-203ENST00000512531 SIL1Q9H173 461 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 GDPD2Q9HCC8 539 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
MSH3-203ENST00000512531 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 POLLQ9UGP5 575 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
MSH3-203ENST00000512531 DDX60Q8IY21 1712 aaKnown RBP11.28□□□□□ -0.6
MSH3-203ENST00000512531 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 ECE2O60344 883 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 SASH1O94885 1247 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 FKBP1BP68106 108 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 DGKZQ13574 1117 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 RSBN1LQ6PCB5 846 aaPredicted RBP11.27□□□□□ -0.61
MSH3-203ENST00000512531 SAMD7Q7Z3H4 446 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.61
MSH3-203ENST00000512531 FAM89AQ96GI7 184 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 TMX3Q96JJ7 454 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 ZC3H12CQ9C0D7 883 aaKnown RBP11.27□□□□□ -0.61
MSH3-203ENST00000512531 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
MSH3-203ENST00000512531 SHTN1A0MZ66 631 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 POM121CA8CG34 1229 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 MAP4K4O95819 1239 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 MBD3O95983 291 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 MMP14P50281 582 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 GPSM2P81274 684 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 PTPN12Q05209 780 aaKnown RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 CUL4AQ13619 759 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 TBC1D10BQ4KMP7 808 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 GORABQ5T7V8 394 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 VPS53Q5VIR6 699 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 ZBTB38Q8NAP3 1195 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSH3-203ENST00000512531 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 CCDC97Q96F63 343 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 LSG1Q9H089 658 aaKnown RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 CCDC8Q9H0W5 538 aaPredicted RBP11.26□□□□□ -0.61
MSH3-203ENST00000512531 DBNDD1Q9H9R9 158 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
MSH3-203ENST00000512531 TAF1P21675 1872 aa11.25□□□□□ -0.61
MSH3-203ENST00000512531 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms