RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SRLQ86TD4 932 aa7.46□□□□□ -1.21
TRAPPC11-209ENST00000512476 NKAPQ8N5F7 415 aaKnown RBP7.46□□□□□ -1.21
TRAPPC11-209ENST00000512476 ABCG4Q9H172 646 aa7.46□□□□□ -1.21
TRAPPC11-209ENST00000512476 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.21
TRAPPC11-209ENST00000512476 TRHDEQ9UKU6 1024 aa7.46□□□□□ -1.21
TRAPPC11-209ENST00000512476 ABCA5Q8WWZ7 1642 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 TMEM127O75204 238 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 PLA2G4AP47712 749 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 ROR1Q01973 937 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 LMNB2Q03252 620 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC10A5Q5PT55 438 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZBTB46Q86UZ6 589 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 PPARGC1BQ86YN6 1023 aaKnown RBP7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC39A7Q92504 469 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 TRIM44Q96DX7 344 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 PRKRIP1Q9H875 184 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 MAFFQ9ULX9 164 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 CEP131Q9UPN4 1083 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZNF652Q9Y2D9 606 aa7.46□□□□□ -1.22
TRAPPC11-209ENST00000512476 CEP162Q5TB80 1403 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 TIPRLO75663 272 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 MBD4O95243 580 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 PRKAR2AP13861 404 aaKnown RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 SAFBQ15424 915 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 MFSD4BQ5TF39 518 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 FBXL19Q6PCT2 694 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 UNC5DQ6UXZ4 953 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 RTL10Q7L3V2 364 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 MCM10Q7L590 875 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 SH3RF1Q7Z6J0 888 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 GALNT5Q7Z7M9 940 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 VMP1Q96GC9 406 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 LRFN2Q9ULH4 789 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 SNX5Q9Y5X3 404 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC4A7Q9Y6M7 1214 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 F5H423 210 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 J3KRW8 73 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 PES1O00541 588 aaKnown RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC10A3P09131 477 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 IFIT1P09914 478 aaKnown RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 GYS1P13807 737 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 PABPC4Q13310 644 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 ELF2Q15723 593 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 PKN2Q16513 984 aaKnown RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 DDB1Q16531 1140 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 COX20Q5RI15 118 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 NUTM2GQ5VZR2 741 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 TBC1D1Q86TI0 1168 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 GJD3Q8N144 294 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 FAM26EQ8N5C1 309 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 STON2Q8WXE9 905 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 GJA10Q969M2 543 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 LRGUKQ96M69 825 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 YTHDC1Q96MU7 727 aaKnown RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 CSRNP1Q96S65 589 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZCCHC17Q9NP64 241 aaKnown RBP7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 RRN3Q9NYV6 651 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZRANB1Q9UGI0 708 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 SMC3Q9UQE7 1217 aa7.45□□□□□ -1.22
TRAPPC11-209ENST00000512476 GTPBP10A4D1E9 387 aaKnown RBP7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 TRIM6-TRIM34B2RNG4 842 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 CD4P01730 458 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 MYBP10242 640 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 ITGAEP38570 1179 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 FBXO41Q8TF61 875 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 CHMP4CQ96CF2 233 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 CSRNP2Q9H175 543 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 VPS45Q9NRW7 570 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 PHLDB1Q86UU1 1377 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 TDRD9Q8NDG6 1382 aaKnown RBP7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 MAP3K6O95382 1288 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 USP17L7P0C7H9 530 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZNF280AP59817 542 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 DNM1Q05193 864 aaKnown RBP7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 CYB5RLQ6IPT4 315 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 SPOCD1Q6ZMY3 1216 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 NUDT18Q6ZVK8 323 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 IL17REQ8NFR9 667 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 TAF4BQ92750 862 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 KCNH8Q96L42 1107 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 CLUHP3Q96NS8 147 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC5A4Q9NY91 659 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 CARMIL1Q5VZK9 1371 aa7.44□□□□□ -1.22
TRAPPC11-209ENST00000512476 GAPVD1Q14C86 1478 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 IFT140Q96RY7 1462 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 ABHD14A-ACY1A0A1B0GW23 586 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 GJB6O95452 261 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 MTHFD1P11586 935 aaKnown RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC5A1P13866 664 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 EIF5P55010 431 aaKnown RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 ANKRD45Q5TZF3 282 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 CDCA2Q69YH5 1023 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 C16orf46Q6P387 395 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 EPM2AIP1Q7L775 607 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZNF296Q8WUU4 475 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZMAT2Q96NC0 199 aaKnown RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 KCNK17Q96T54 332 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 NAA15Q9BXJ9 866 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms