RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 KIF1BO60333 1816 aa7.36□□□□□ -1.23
MSH3-202ENST00000512258 ZNF142P52746 1687 aaPredicted RBP7.36□□□□□ -1.23
MSH3-202ENST00000512258 TNFRSF10BO14763 440 aa7.36□□□□□ -1.23
MSH3-202ENST00000512258 HSPA2P54652 639 aa7.36□□□□□ -1.23
MSH3-202ENST00000512258 ZNF648Q5T619 568 aaPredicted RBP7.36□□□□□ -1.23
MSH3-202ENST00000512258 FDX2Q6P4F2 183 aa7.36□□□□□ -1.23
MSH3-202ENST00000512258 OSBPL1AQ9BXW6 950 aa7.36□□□□□ -1.23
MSH3-202ENST00000512258 PPP1R12CQ9BZL4 782 aa7.36□□□□□ -1.23
MSH3-202ENST00000512258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
MSH3-202ENST00000512258 UHRF1BP1Q6BDS2 1440 aa7.35□□□□□ -1.23
MSH3-202ENST00000512258 A6NJR5 290 aa7.35□□□□□ -1.23
MSH3-202ENST00000512258 NFKBIEO00221 500 aa7.35□□□□□ -1.23
MSH3-202ENST00000512258 TIAF1O95411 115 aa7.35□□□□□ -1.23
MSH3-202ENST00000512258 ADMP35318 185 aa7.35□□□□□ -1.23
MSH3-202ENST00000512258 SCNN1AP37088 669 aa7.35□□□□□ -1.23
MSH3-202ENST00000512258 ZNF326Q5BKZ1 582 aaKnown RBP7.35□□□□□ -1.23
MSH3-202ENST00000512258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.35□□□□□ -1.23
MSH3-202ENST00000512258 LMTK3Q96Q04 1460 aa7.35□□□□□ -1.23
MSH3-202ENST00000512258 TONSLQ96HA7 1378 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 NEXMIFQ5QGS0 1516 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 SETD1BQ9UPS6 1966 aaKnown RBP7.34□□□□□ -1.23
MSH3-202ENST00000512258 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
MSH3-202ENST00000512258 ACPPP15309 386 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 LTKP29376 864 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 FNBP4Q8N3X1 1017 aaPredicted RBP7.34□□□□□ -1.23
MSH3-202ENST00000512258 GIMAP7Q8NHV1 300 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 GATA6Q92908 595 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 TMPRSS13Q9BYE2 586 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.23
MSH3-202ENST00000512258 ZFYVE9O95405 1425 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 RIMS2Q9UQ26 1411 aa7.34□□□□□ -1.23
MSH3-202ENST00000512258 TMEM2Q9UHN6 1383 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 ADGRF5Q8IZF2 1346 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 IFT172Q9UG01 1749 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 ARHGAP23Q9P227 1491 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
MSH3-202ENST00000512258 ZNF124Q15973 351 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 PIK3R5Q8WYR1 880 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 VRTNQ9H8Y1 702 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 ABI2Q9NYB9 513 aaPredicted RBP7.33□□□□□ -1.24
MSH3-202ENST00000512258 PPLO60437 1756 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 NEURL4Q96JN8 1562 aa7.33□□□□□ -1.24
MSH3-202ENST00000512258 KDM5AP29375 1690 aaKnown RBP7.32□□□□□ -1.24
MSH3-202ENST00000512258 DLGAP3O95886 979 aa7.32□□□□□ -1.24
MSH3-202ENST00000512258 NBPF8Q3BBV2 869 aa7.32□□□□□ -1.24
MSH3-202ENST00000512258 TTC39BQ5VTQ0 682 aaPredicted RBP7.32□□□□□ -1.24
MSH3-202ENST00000512258 CDPF1Q6NVV7 123 aa7.32□□□□□ -1.24
MSH3-202ENST00000512258 THEMISQ8N1K5 641 aaPredicted RBP7.32□□□□□ -1.24
MSH3-202ENST00000512258 SMG8Q8ND04 991 aaKnown RBP7.32□□□□□ -1.24
MSH3-202ENST00000512258 SUGCTQ9HAC7 445 aa7.32□□□□□ -1.24
MSH3-202ENST00000512258 SLIT1O75093 1534 aa7.32□□□□□ -1.24
MSH3-202ENST00000512258 FAM95CA0A1B0GW59 222 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 DBX1A6NMT0 343 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 CYP26A1O43174 497 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 C16orf46Q6P387 395 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 TXNDC2Q86VQ3 553 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 FLCNQ8NFG4 579 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 HHIPQ96QV1 700 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 METTL22Q9BUU2 404 aaPredicted RBP7.31□□□□□ -1.24
MSH3-202ENST00000512258 SOX13Q9UN79 622 aa7.31□□□□□ -1.24
MSH3-202ENST00000512258 RPGRIP1LQ68CZ1 1315 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 FAM170BA6NMN3 283 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 PPP1R15AO75807 674 aaPredicted RBP7.3□□□□□ -1.24
MSH3-202ENST00000512258 RXRBP28702 533 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 OCLNQ16625 522 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 CAPN12Q6ZSI9 719 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 ZAR1Q86SH2 424 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 NCAPG2Q86XI2 1143 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 AGBL5Q8NDL9 886 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 SLC7A3Q8WY07 619 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 PRIMPOLQ96LW4 560 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 KANSL3Q9P2N6 904 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 SALL4Q9UJQ4 1053 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 MYOM2P54296 1465 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 SCAF11Q99590 1463 aaKnown RBP7.3□□□□□ -1.24
MSH3-202ENST00000512258 NRXN1Q9ULB1 1477 aa7.3□□□□□ -1.24
MSH3-202ENST00000512258 PRAG1Q86YV5 1406 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 ZBTB39O15060 712 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 ZAP70P43403 619 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 NFKBIBQ15653 356 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 CFAP70Q5T0N1 1121 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 C12orf50Q8NA57 414 aaPredicted RBP7.29□□□□□ -1.24
MSH3-202ENST00000512258 GPR152Q8TDT2 470 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 FBLIM1Q8WUP2 373 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 EZH1Q92800 747 aaPredicted RBP7.29□□□□□ -1.24
MSH3-202ENST00000512258 KRTAP17-1Q9BYP8 105 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 TMEM63CQ9P1W3 806 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 CNTN3Q9P232 1028 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 ZC3H7BQ9UGR2 993 aaKnown RBP7.29□□□□□ -1.24
MSH3-202ENST00000512258 NRXN3Q9Y4C0 1643 aa7.29□□□□□ -1.24
MSH3-202ENST00000512258 IQGAP1P46940 1657 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 STRCQ7RTU9 1775 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 PIK3C2GO75747 1445 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 LOC100289279A0A1B0GTE1 492 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 TRPA1O75762 1119 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 DRD2P14416 443 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 LMOD1P29536 600 aaPredicted RBP7.28□□□□□ -1.24
MSH3-202ENST00000512258 CABP4P57796 275 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms