RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 SYCP3Q8IZU3 236 aa9.11□□□□□ -0.95
NEK1-208ENST00000512193 CTNNBL1Q8WYA6 563 aaPredicted RBP9.11□□□□□ -0.95
NEK1-208ENST00000512193 PLCD4Q9BRC7 762 aa9.11□□□□□ -0.95
NEK1-208ENST00000512193 VPS54Q9P1Q0 977 aa9.11□□□□□ -0.95
NEK1-208ENST00000512193 PREX2Q70Z35 1606 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 ARHGAP6O43182 974 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 SASH1O94885 1247 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 NDUFA8P51970 172 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 TNIP1Q15025 636 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 KRT79Q5XKE5 535 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 SMAP1Q8IYB5 467 aaPredicted RBP9.1□□□□□ -0.95
NEK1-208ENST00000512193 SERTAD1Q9UHV2 236 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 ATP7BP35670 1465 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 NEO1Q92859 1461 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 KRT9P35527 623 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 ADKP55263 362 aaKnown RBP9.1□□□□□ -0.95
NEK1-208ENST00000512193 DNAJC21Q5F1R6 531 aaKnown RBP9.1□□□□□ -0.95
NEK1-208ENST00000512193 SPATA5Q8NB90 893 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 FBXO18Q8NFZ0 1043 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 KIF2CQ99661 725 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 LRRC27Q9C0I9 530 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 BTBD18B2RXH4 712 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 TBCAO75347 108 aaKnown RBP9.1□□□□□ -0.95
NEK1-208ENST00000512193 LDHBP07195 334 aaKnown RBP9.1□□□□□ -0.95
NEK1-208ENST00000512193 ADORA1P30542 326 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 ERCC6LQ2NKX8 1250 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 TTC38Q5R3I4 469 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 CLIC6Q96NY7 704 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 CLIC4Q9Y696 253 aa9.1□□□□□ -0.95
NEK1-208ENST00000512193 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 WDHD1O75717 1129 aaPredicted RBP9.09□□□□□ -0.95
NEK1-208ENST00000512193 ERCC3P19447 782 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 AKNAD1Q5T1N1 836 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 TAB2Q9NYJ8 693 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 SAMM50Q9Y512 469 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 USP6P35125 1406 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 CETN1Q12798 172 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 RRP36Q96EU6 259 aaKnown RBP9.09□□□□□ -0.95
NEK1-208ENST00000512193 SAP30BPQ9UHR5 308 aaKnown RBP9.09□□□□□ -0.95
NEK1-208ENST00000512193 HSF2BPO75031 334 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 PDE6AP16499 860 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 GNA11P29992 359 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 NECTIN1Q15223 517 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 ARHGEF25Q86VW2 580 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 LRRC8AQ8IWT6 810 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 CACTINQ8WUQ7 758 aaKnown RBP9.09□□□□□ -0.95
NEK1-208ENST00000512193 ZNF622Q969S3 477 aaKnown RBP eCLIP9.09□□□□□ -0.956e-7■□□□□ 8.9
NEK1-208ENST00000512193 RBM28Q9NW13 759 aaKnown RBP9.09□□□□□ -0.95
NEK1-208ENST00000512193 AATFQ9NY61 560 aaKnown RBP eCLIP9.09□□□□□ -0.95
NEK1-208ENST00000512193 TFCP2L1Q9NZI6 479 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 SYNRGQ9UMZ2 1314 aa9.09□□□□□ -0.95
NEK1-208ENST00000512193 CDC42BPAQ5VT25 1732 aa9.09□□□□□ -0.96
NEK1-208ENST00000512193 CETN2P41208 172 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 NSUN7Q8NE18 718 aaKnown RBP9.08□□□□□ -0.96
NEK1-208ENST00000512193 DENND2AQ9ULE3 1009 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 ZDHHC9Q9Y397 364 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 ADCY9O60503 1353 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 BICDL2A1A5D9 508 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 CHMP4BP1P59074 171 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 PDE4DQ08499 809 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 POLA2Q14181 598 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 MRFAP1L1Q96HT8 127 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 DESI2Q9BSY9 194 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 BLZF1Q9H2G9 400 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 FANCLQ9NW38 375 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 MAP2K1Q02750 393 aaPredicted RBP9.08□□□□□ -0.96
NEK1-208ENST00000512193 ZNF654Q8IZM8 581 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 NEK11Q8NG66 645 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 ATP2C2O75185 946 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 CMA1P23946 247 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 HIBADHP31937 336 aaKnown RBP9.08□□□□□ -0.96
NEK1-208ENST00000512193 PTPN21Q16825 1174 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 CSGALNACT2Q8N6G5 542 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 KIAA1524Q8TCG1 905 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 ATRIPQ8WXE1 791 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 SLF1Q9BQI6 1058 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 PODXL2Q9NZ53 605 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 MLH3Q9UHC1 1453 aa9.08□□□□□ -0.96
NEK1-208ENST00000512193 POTEJP0CG39 1038 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 ZMYM1Q5SVZ6 1142 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 SPECC1LQ69YQ0 1117 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 C11orf57Q6ZUT1 292 aaPredicted RBP9.07□□□□□ -0.96
NEK1-208ENST00000512193 TDRD7Q8NHU6 1098 aaKnown RBP9.07□□□□□ -0.96
NEK1-208ENST00000512193 ERMNQ8TAM6 284 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 IFT81Q8WYA0 676 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 NOC4LQ9BVI4 516 aaKnown RBP9.07□□□□□ -0.96
NEK1-208ENST00000512193 TRAF5O00463 557 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 EIF6P56537 245 aaKnown RBP9.07□□□□□ -0.96
NEK1-208ENST00000512193 ETF1P62495 437 aaKnown RBP9.07□□□□□ -0.96
NEK1-208ENST00000512193 PTPN12Q05209 780 aaKnown RBP9.07□□□□□ -0.96
NEK1-208ENST00000512193 PAK1Q13153 545 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 PARP10Q53GL7 1025 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 FAM47AQ5JRC9 791 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 ZNF804AQ7Z570 1209 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 NOSTRINQ8IVI9 506 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 IFNL3Q8IZI9 196 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 SDR42E1Q8WUS8 393 aa9.07□□□□□ -0.96
NEK1-208ENST00000512193 NAPGQ99747 312 aaPredicted RBP9.07□□□□□ -0.96
NEK1-208ENST00000512193 PCDHA5Q9Y5H7 936 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms