RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 FOCADQ5VW36 1801 aa20.17■□□□□ 0.82
DDX41-213ENST00000512027 ATRNL1Q5VV63 1379 aa20.17■□□□□ 0.82
DDX41-213ENST00000512027 MANSC4A6NHS7 340 aaPredicted RBP20.16■□□□□ 0.82
DDX41-213ENST00000512027 IGF2BP3O00425 579 aaKnown RBP eCLIP20.16■□□□□ 0.82
DDX41-213ENST00000512027 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
DDX41-213ENST00000512027 ENTPD3O75355 529 aa20.16■□□□□ 0.82
DDX41-213ENST00000512027 LDHCP07864 332 aa20.16■□□□□ 0.82
DDX41-213ENST00000512027 DCAF15Q66K64 600 aa20.16■□□□□ 0.82
DDX41-213ENST00000512027 CLASRPQ8N2M8 674 aaKnown RBP20.16■□□□□ 0.82
DDX41-213ENST00000512027 SH3RF3Q8TEJ3 882 aaPredicted RBP20.16■□□□□ 0.82
DDX41-213ENST00000512027 ZNF341Q9BYN7 854 aa20.16■□□□□ 0.82
DDX41-213ENST00000512027 R3HDMLQ9H3Y0 253 aa20.16■□□□□ 0.82
DDX41-213ENST00000512027 ZSCAN29Q8IWY8 852 aaPredicted RBP20.15■□□□□ 0.82
DDX41-213ENST00000512027 HOOK2Q96ED9 719 aa20.15■□□□□ 0.82
DDX41-213ENST00000512027 AATFQ9NY61 560 aaKnown RBP eCLIP20.15■□□□□ 0.82
DDX41-213ENST00000512027 SIPA1L1O43166 1804 aa20.15■□□□□ 0.82
DDX41-213ENST00000512027 RAB11FIP3O75154 756 aa20.14■□□□□ 0.81
DDX41-213ENST00000512027 IDH1O75874 414 aaKnown RBP20.14■□□□□ 0.81
DDX41-213ENST00000512027 IFIT2P09913 472 aaKnown RBP20.14■□□□□ 0.81
DDX41-213ENST00000512027 IFNL1Q8IU54 200 aa20.14■□□□□ 0.81
DDX41-213ENST00000512027 SPDYE5A6NIY4 337 aa20.13■□□□□ 0.81
DDX41-213ENST00000512027 DYNLL1P63167 89 aaKnown RBP20.13■□□□□ 0.81
DDX41-213ENST00000512027 TEX11Q8IYF3 940 aa20.13■□□□□ 0.81
DDX41-213ENST00000512027 CRBNQ96SW2 442 aa20.13■□□□□ 0.81
DDX41-213ENST00000512027 PTPN18Q99952 460 aa20.13■□□□□ 0.81
DDX41-213ENST00000512027 DOCK1Q14185 1865 aa20.13■□□□□ 0.81
DDX41-213ENST00000512027 FAM196BA6NMK8 535 aa20.12■□□□□ 0.81
DDX41-213ENST00000512027 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
DDX41-213ENST00000512027 MS4A4AQ96JQ5 239 aa20.12■□□□□ 0.81
DDX41-213ENST00000512027 ZNF112Q9UJU3 913 aa20.12■□□□□ 0.81
DDX41-213ENST00000512027 PCDHB15Q9Y5E8 787 aa20.12■□□□□ 0.81
DDX41-213ENST00000512027 CYP7A1P22680 504 aa20.11■□□□□ 0.81
DDX41-213ENST00000512027 MAGEB6Q8N7X4 407 aa20.11■□□□□ 0.81
DDX41-213ENST00000512027 MIGA1Q8NAN2 632 aa20.11■□□□□ 0.81
DDX41-213ENST00000512027 BRI3BPQ8WY22 251 aa20.11■□□□□ 0.81
DDX41-213ENST00000512027 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
DDX41-213ENST00000512027 NOL10Q9BSC4 688 aaKnown RBP20.11■□□□□ 0.81
DDX41-213ENST00000512027 OSBPL5Q9H0X9 879 aaPredicted RBP20.11■□□□□ 0.81
DDX41-213ENST00000512027 ATAD5Q96QE3 1844 aa20.11■□□□□ 0.81
DDX41-213ENST00000512027 CCL15-CCL14A0A0B4J2E2 113 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 IRF6O14896 467 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 DGKZQ13574 1117 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 CCL15Q16663 113 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 ERO1BQ86YB8 467 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 MAPKAPK5Q8IW41 473 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 ZNF296Q8WUU4 475 aaPredicted RBP20.1■□□□□ 0.81
DDX41-213ENST00000512027 LRRCC1Q9C099 1032 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 MCOLN1Q9GZU1 580 aa20.1■□□□□ 0.81
DDX41-213ENST00000512027 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.1■□□□□ 0.81
DDX41-213ENST00000512027 PHIPQ8WWQ0 1821 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 TESPA1A2RU30 521 aaPredicted RBP20.09■□□□□ 0.81
DDX41-213ENST00000512027 PHF20L1A8MW92 1017 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 GPR25O00155 361 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 GOLIM4O00461 696 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 INHBEP58166 350 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 TGFBRAP1Q8WUH2 860 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 ABHD8Q96I13 439 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 MYH1P12882 1939 aa20.09■□□□□ 0.81
DDX41-213ENST00000512027 COL2A1P02458 1487 aaPredicted RBP20.08■□□□□ 0.81
DDX41-213ENST00000512027 BAG3O95817 575 aa20.08■□□□□ 0.81
DDX41-213ENST00000512027 GTF2A2P52657 109 aa20.08■□□□□ 0.81
DDX41-213ENST00000512027 PPP4CP60510 307 aa20.08■□□□□ 0.81
DDX41-213ENST00000512027 PPIL2Q13356 520 aa20.08■□□□□ 0.81
DDX41-213ENST00000512027 BOLA2Q9H3K6 86 aa20.08■□□□□ 0.81
DDX41-213ENST00000512027 MYH7P12883 1935 aa20.08■□□□□ 0.8
DDX41-213ENST00000512027 FLT1P17948 1338 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
DDX41-213ENST00000512027 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
DDX41-213ENST00000512027 ALDH1A1P00352 501 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 MAP3K12Q12852 859 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 CRHR2Q13324 411 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 NOL9Q5SY16 702 aaKnown RBP20.07■□□□□ 0.8
DDX41-213ENST00000512027 CCDC84Q86UT8 332 aaPredicted RBP20.07■□□□□ 0.8
DDX41-213ENST00000512027 FAM43AQ8N2R8 423 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 CFHR5Q9BXR6 569 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 PTPRFP10586 1907 aa20.07■□□□□ 0.8
DDX41-213ENST00000512027 MAP3K10Q02779 954 aa20.06■□□□□ 0.8
DDX41-213ENST00000512027 PPATQ06203 517 aa20.06■□□□□ 0.8
DDX41-213ENST00000512027 SLFNL1Q499Z3 407 aa20.06■□□□□ 0.8
DDX41-213ENST00000512027 NAV1Q8NEY1 1877 aa20.06■□□□□ 0.8
DDX41-213ENST00000512027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDX41-213ENST00000512027 SAP30BPQ9UHR5 308 aaKnown RBP20.06■□□□□ 0.8
DDX41-213ENST00000512027 DDX60LQ5H9U9 1706 aaKnown RBP20.05■□□□□ 0.8
DDX41-213ENST00000512027 PLCG2P16885 1265 aa20.05■□□□□ 0.8
DDX41-213ENST00000512027 TSHZ3Q63HK5 1081 aa20.05■□□□□ 0.8
DDX41-213ENST00000512027 SCYL3Q8IZE3 742 aa20.05■□□□□ 0.8
DDX41-213ENST00000512027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.05■□□□□ 0.8
DDX41-213ENST00000512027 ZSWIM8A7E2V4 1837 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 CHGBP05060 677 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 PDE6AP16499 860 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 ATP5JP18859 108 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 SNAPC2Q13487 334 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 RRP1BQ14684 758 aaKnown RBP20.04■□□□□ 0.8
DDX41-213ENST00000512027 TTF1Q15361 905 aaPredicted RBP20.04■□□□□ 0.8
DDX41-213ENST00000512027 SLC9C2Q5TAH2 1124 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 OTUD7BQ6GQQ9 843 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 PAG1Q9NWQ8 432 aa20.04■□□□□ 0.8
DDX41-213ENST00000512027 PALD1Q9ULE6 856 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms