RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 PDE8BO95263 885 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 SYN1P17600 705 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 PTPRAP18433 802 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 FAM109BQ6ICB4 259 aaPredicted RBP14.58□□□□□ -0.08
RNF4-216ENST00000511859 CDC42EP5Q6NZY7 148 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 GADL1Q6ZQY3 521 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 SCYL3Q8IZE3 742 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 WDR66Q8TBY9 1149 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 SPTBN5Q9NRC6 3674 aaKnown RBP14.58□□□□□ -0.08
RNF4-216ENST00000511859 EYSQ5T1H1 3165 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 IL16Q14005 1332 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 PTPRFP10586 1907 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 DNAH12Q6ZR08 3092 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 PHF20L1A8MW92 1017 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 POTEB2H3BUK9 544 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 HMGCRP04035 888 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 DDX10Q13206 875 aaKnown RBP14.57□□□□□ -0.08
RNF4-216ENST00000511859 METTL24Q5JXM2 366 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 WWC1Q8IX03 1113 aa14.57□□□□□ -0.08
RNF4-216ENST00000511859 KIF16BQ96L93 1317 aa14.56□□□□□ -0.08
RNF4-216ENST00000511859 NFIAQ12857 509 aa14.56□□□□□ -0.08
RNF4-216ENST00000511859 FAM110CQ1W6H9 321 aa14.56□□□□□ -0.08
RNF4-216ENST00000511859 ANKRD13CQ8N6S4 541 aa14.56□□□□□ -0.08
RNF4-216ENST00000511859 PNMA3Q9UL41 463 aa14.56□□□□□ -0.08
RNF4-216ENST00000511859 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
RNF4-216ENST00000511859 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
RNF4-216ENST00000511859 MAP3K10Q02779 954 aa14.55□□□□□ -0.08
RNF4-216ENST00000511859 VGLL2Q8N8G2 317 aa14.55□□□□□ -0.08
RNF4-216ENST00000511859 USP40Q9NVE5 1235 aa14.55□□□□□ -0.08
RNF4-216ENST00000511859 FAM198AQ9UFP1 575 aa14.55□□□□□ -0.08
RNF4-216ENST00000511859 AGTPBP1Q9UPW5 1226 aa14.55□□□□□ -0.08
RNF4-216ENST00000511859 DAGLAQ9Y4D2 1042 aa14.55□□□□□ -0.08
RNF4-216ENST00000511859 TTC28Q96AY4 2481 aa14.55□□□□□ -0.08
RNF4-216ENST00000511859 CTNND1O60716 968 aaKnown RBP14.54□□□□□ -0.08
RNF4-216ENST00000511859 GCLCP48506 637 aaPredicted RBP14.54□□□□□ -0.08
RNF4-216ENST00000511859 LRRC24Q50LG9 513 aa14.54□□□□□ -0.08
RNF4-216ENST00000511859 KAZALD1Q96I82 304 aa14.54□□□□□ -0.08
RNF4-216ENST00000511859 GJD2Q9UKL4 321 aa14.54□□□□□ -0.08
RNF4-216ENST00000511859 LRRFIP2Q9Y608 721 aaKnown RBP14.54□□□□□ -0.08
RNF4-216ENST00000511859 MYH13Q9UKX3 1938 aa14.54□□□□□ -0.08
RNF4-216ENST00000511859 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
RNF4-216ENST00000511859 SUCLG2Q96I99 432 aa14.53□□□□□ -0.08
RNF4-216ENST00000511859 GUCD1Q96NT3 240 aa14.53□□□□□ -0.08
RNF4-216ENST00000511859 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
RNF4-216ENST00000511859 PRKRIP1Q9H875 184 aaPredicted RBP14.53□□□□□ -0.08
RNF4-216ENST00000511859 PRDM6Q9NQX0 595 aa14.53□□□□□ -0.08
RNF4-216ENST00000511859 DDX60LQ5H9U9 1706 aaKnown RBP14.53□□□□□ -0.08
RNF4-216ENST00000511859 ENTPD3O75355 529 aa14.52□□□□□ -0.08
RNF4-216ENST00000511859 PUM3Q15397 648 aaKnown RBP14.52□□□□□ -0.08
RNF4-216ENST00000511859 DIXDC1Q155Q3 683 aa14.52□□□□□ -0.08
RNF4-216ENST00000511859 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.08
RNF4-216ENST00000511859 ZFPM1Q8IX07 1006 aa14.52□□□□□ -0.08
RNF4-216ENST00000511859 IDI2Q9BXS1 227 aa14.52□□□□□ -0.08
RNF4-216ENST00000511859 PHIPQ8WWQ0 1821 aa14.52□□□□□ -0.09
RNF4-216ENST00000511859 ATRNL1Q5VV63 1379 aa14.51□□□□□ -0.09
RNF4-216ENST00000511859 TRIM75PA6NK02 468 aa14.51□□□□□ -0.09
RNF4-216ENST00000511859 NBPF7P0C2Y1 421 aaPredicted RBP14.51□□□□□ -0.09
RNF4-216ENST00000511859 FGFR2P21802 821 aa14.51□□□□□ -0.09
RNF4-216ENST00000511859 PABPC4Q13310 644 aaKnown RBP eCLIP14.51□□□□□ -0.09
RNF4-216ENST00000511859 PROCA1Q8NCQ7 364 aaPredicted RBP14.51□□□□□ -0.09
RNF4-216ENST00000511859 MUC3AQ02505 3323 aa14.51□□□□□ -0.09
RNF4-216ENST00000511859 UTYO14607 1347 aa14.51□□□□□ -0.09
RNF4-216ENST00000511859 LDHBP07195 334 aaKnown RBP14.5□□□□□ -0.09
RNF4-216ENST00000511859 RGS3P49796 1198 aa14.5□□□□□ -0.09
RNF4-216ENST00000511859 SLC4A10Q6U841 1118 aa14.5□□□□□ -0.09
RNF4-216ENST00000511859 ZSCAN29Q8IWY8 852 aaPredicted RBP14.5□□□□□ -0.09
RNF4-216ENST00000511859 BICC1Q9H694 974 aaKnown RBP14.5□□□□□ -0.09
RNF4-216ENST00000511859 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
RNF4-216ENST00000511859 PFASO15067 1338 aa14.5□□□□□ -0.09
RNF4-216ENST00000511859 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
RNF4-216ENST00000511859 DOCK2Q92608 1830 aa14.5□□□□□ -0.09
RNF4-216ENST00000511859 MYH2Q9UKX2 1941 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 COL6A1P12109 1028 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 SLC5A1P13866 664 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 PRDX5P30044 214 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 MDM2Q00987 491 aaPredicted RBP14.49□□□□□ -0.09
RNF4-216ENST00000511859 TRIM32Q13049 653 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 TREML2Q5T2D2 321 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 MAP3K21Q5TCX8 1036 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 LPIN2Q92539 896 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 TBC1D2Q9BYX2 928 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 DOCK1Q14185 1865 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 CDH23Q9H251 3354 aa14.49□□□□□ -0.09
RNF4-216ENST00000511859 TBC1D12O60347 775 aa14.48□□□□□ -0.09
RNF4-216ENST00000511859 XRCC5P13010 732 aaKnown RBP14.48□□□□□ -0.09
RNF4-216ENST00000511859 EXOSC9Q06265 439 aaKnown RBP14.48□□□□□ -0.09
RNF4-216ENST00000511859 ZNF697Q5TEC3 545 aa14.48□□□□□ -0.09
RNF4-216ENST00000511859 TRMT44Q8IYL2 757 aaKnown RBP14.48□□□□□ -0.09
RNF4-216ENST00000511859 TRIB2Q92519 343 aa14.48□□□□□ -0.09
RNF4-216ENST00000511859 GNL3LQ9NVN8 582 aaKnown RBP14.48□□□□□ -0.09
RNF4-216ENST00000511859 SALL1Q9NSC2 1324 aa14.48□□□□□ -0.09
RNF4-216ENST00000511859 SH3BP5LQ7L8J4 393 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 WDR63Q8IWG1 891 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 SYMPKQ92797 1274 aaKnown RBP14.47□□□□□ -0.09
RNF4-216ENST00000511859 FAM161BQ96MY7 647 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 LBHD1Q9BQE6 289 aaPredicted RBP14.47□□□□□ -0.09
RNF4-216ENST00000511859 COL2A1P02458 1487 aaPredicted RBP14.47□□□□□ -0.09
RNF4-216ENST00000511859 DDTLA6NHG4 134 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms