RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 SNCAIPQ9Y6H5 919 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 LOC100289279A0A1B0GTE1 492 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 MEGF11A6BM72 1044 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 DHX15O43143 795 aaKnown RBP6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 ALX3O95076 343 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 FURINP09958 794 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 ATP2B1P20020 1258 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 DNAJA1P31689 397 aaKnown RBP6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 ZNF165P49910 485 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 GRIN3AQ8TCU5 1115 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 RASGRP4Q8TDF6 673 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 GPBAR1Q8TDU6 330 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 ELMO3Q96BJ8 720 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 TINF2Q9BSI4 451 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 TANGO6Q9C0B7 1094 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 PICK1Q9NRD5 415 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 USP35Q9P2H5 1018 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 STRIP2Q9ULQ0 834 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 PCDHB5Q9Y5E4 795 aa6.14□□□□□ -1.43
CALCOCO2-220ENST00000511816 WISP1O95388 367 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 F13A1P00488 732 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 H2AFB2P0C5Z0 115 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 TNNI2P48788 182 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 PDE4BQ07343 736 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 SEPT6Q14141 434 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 KIF4BQ2VIQ3 1234 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 C12orf50Q8NA57 414 aaPredicted RBP6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 UTP4Q969X6 686 aaKnown RBP6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 YIPF2Q9BWQ6 316 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 LRRC3Q9BY71 257 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 NRSN2Q9GZP1 204 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 CCDC86Q9H6F5 360 aaKnown RBP6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 KCNK4Q9NYG8 393 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 PRKAG2Q9UGJ0 569 aa6.13□□□□□ -1.43
CALCOCO2-220ENST00000511816 ADAM11O75078 769 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 AOC2O75106 756 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 CILPO75339 1184 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 SSBP05455 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 IMPDH2P12268 514 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 LIG1P18858 919 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 GARTP22102 1010 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 MCM4P33991 863 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 BNC2Q6ZN30 1099 aaPredicted RBP6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 KIAA1211Q6ZU35 1233 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 CPLX3Q8WVH0 158 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 EAF1Q96JC9 268 aaPredicted RBP6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 MEGF10Q96KG7 1140 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 GMLQ99445 158 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 SEMA6BQ9H3T3 888 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 TACC3Q9Y6A5 838 aa6.12□□□□□ -1.43
CALCOCO2-220ENST00000511816 ATF4P18848 351 aaPredicted RBP6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 ID3Q02535 119 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 SEZ6Q53EL9 994 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 AKAP4Q5JQC9 854 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 Q6ZS46 218 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 REC114Q7Z4M0 266 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 SLITRK4Q8IW52 837 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 DZIP1LQ8IYY4 767 aaKnown RBP6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 REXO1Q8N1G1 1221 aaKnown RBP6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 GAL3ST3Q96A11 431 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 CRBNQ96SW2 442 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 TMPRSS13Q9BYE2 586 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 KCNF1Q9H3M0 494 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 ATXN3LQ9H3M9 355 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 CACNA2D2Q9NY47 1150 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 UBP1Q9NZI7 540 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 PPP1R1BQ9UD71 204 aaPredicted RBP6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 HIF3AQ9Y2N7 669 aa6.11□□□□□ -1.43
CALCOCO2-220ENST00000511816 FAM221AA4D161 298 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 GSC2O15499 205 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 USP11P51784 963 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 ERVK-24P63145 666 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 WIPI1Q5MNZ9 446 aaPredicted RBP6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 SOGA3Q5TF21 947 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 KCT2Q8NC54 265 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 SMG8Q8ND04 991 aaKnown RBP6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 UBXN4Q92575 508 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 ARMC5Q96C12 935 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 WDR18Q9BV38 432 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 SUGCTQ9HAC7 445 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 EFR3BQ9Y2G0 817 aa6.1□□□□□ -1.43
CALCOCO2-220ENST00000511816 TM4SF5O14894 197 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 TLR3O15455 904 aaKnown RBP6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 DYRK3O43781 588 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 ZNF862O60290 1169 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 ADAM23O75077 832 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 ECEL1O95672 775 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 RXRBP28702 533 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 NASPP49321 788 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 RSPO4Q2I0M5 234 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 LRRFIP1Q32MZ4 808 aaKnown RBP6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 RASIP1Q5U651 963 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 CDC37L1Q7L3B6 337 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 FERD3LQ96RJ6 166 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 SSBP4Q9BWG4 385 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 PIDD1Q9HB75 910 aa6.09□□□□□ -1.43
CALCOCO2-220ENST00000511816 STOML1Q9UBI4 398 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms