RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 DDX4Q9NQI0 724 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-215ENST00000511586 STAP2Q9UGK3 403 aa8.66□□□□□ -1.02
PDLIM5-215ENST00000511586 FZD1Q9UP38 647 aa8.66□□□□□ -1.02
PDLIM5-215ENST00000511586 SSC5DA1L4H1 1573 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 RFX7Q2KHR2 1363 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 SALL3Q9BXA9 1300 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 ZNF532Q9HCE3 1301 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 MAGEB6P1A0A0J9YX57 407 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 TCRBV5S4A2TA0A5A2 114 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 SLC10A3P09131 477 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 ADD2P35612 726 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 PDE1AP54750 535 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 DYNLL1P63167 89 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 NOGQ13253 232 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 UBE3CQ15386 1083 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 LRRFIP1Q32MZ4 808 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 MIGA2Q7L4E1 593 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 ANKRD13AQ8IZ07 590 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 KBTBD3Q8NAB2 608 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 TGFBRAP1Q8WUH2 860 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 CSRNP1Q96S65 589 aa8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 OSBPL5Q9H0X9 879 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-215ENST00000511586 CEP350Q5VT06 3117 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 DDTLA6NHG4 134 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 FAM155AB1AL88 458 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 AOC2O75106 756 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 ZFYP08048 801 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 USP5P45974 858 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 MAP3K9P80192 1104 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 MAP2K1Q02750 393 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 SH3BP5LQ7L8J4 393 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 RASAL3Q86YV0 1011 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 CLMNQ96JQ2 1002 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 WRNIP1Q96S55 665 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 ZNF341Q9BYN7 854 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 CSADQ9Y600 493 aa8.64□□□□□ -1.03
PDLIM5-215ENST00000511586 FLT1P17948 1338 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 RNF113AO15541 343 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 MAP3K10Q02779 954 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 VGLL4Q14135 290 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 MAPKAPK5Q8IW41 473 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 RIOK1Q9BRS2 568 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 CRNKL1Q9BZJ0 848 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 PI4KBQ9UBF8 816 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 ZNF112Q9UJU3 913 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 MAST2Q6P0Q8 1798 aa8.63□□□□□ -1.03
PDLIM5-215ENST00000511586 ATRNL1Q5VV63 1379 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 TBC1D12O60347 775 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 HLA-DOAP06340 250 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 ZBTB48P10074 688 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 KIF23Q02241 960 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 APPBP2Q92624 585 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 ZKSCAN4Q969J2 545 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 AIDAQ96BJ3 306 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 EVI5LQ96CN4 794 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 FSD1Q9BTV5 496 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 OSBPL3Q9H4L5 887 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 ELP3Q9H9T3 547 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 WBP1LQ9NX94 342 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 SAP30BPQ9UHR5 308 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 PALD1Q9ULE6 856 aa8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 COL2A1P02458 1487 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 MYO5AQ9Y4I1 1855 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-215ENST00000511586 DOCK2Q92608 1830 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 PHF20L1A8MW92 1017 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 MBD4O95243 580 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 CHGBP05060 677 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 HSPA1AP0DMV8 641 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 HSPA1BP0DMV9 641 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 INPP5BP32019 993 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 MKRN3Q13064 507 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 TTC6Q86TZ1 520 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 TICAM2Q86XR7 235 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 ERO1BQ86YB8 467 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 LCORLQ8N3X6 602 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 OSBP2Q969R2 916 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 OPTNQ96CV9 577 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 WNK4Q96J92 1243 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 ZIC5Q96T25 663 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 TRIM34Q9BYJ4 488 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 PUS7LQ9H0K6 701 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 ARMT1Q9H993 441 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 ATP8A2Q9NTI2 1148 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 HERC5Q9UII4 1024 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 SNCAIPQ9Y6H5 919 aa8.61□□□□□ -1.03
PDLIM5-215ENST00000511586 MANSC4A6NHS7 340 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 TRIM6-TRIM34B2RNG4 842 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms