RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PDE3AQ14432 1141 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 PRPF40BQ6NWY9 871 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 DNAJC14Q6Y2X3 702 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 TMC7Q7Z402 723 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 TP53INP2Q8IXH6 220 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 TRIM56Q9BRZ2 755 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 SEMA6CQ9H3T2 930 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 GSX1Q9H4S2 264 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 ACSS3Q9H6R3 686 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 NPHS2Q9NP85 383 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 GLI2P10070 1586 aa6.15□□□□□ -1.42
TOPBP1-208ENST00000511439 WIZO95785 1651 aa6.15□□□□□ -1.42
TOPBP1-208ENST00000511439 AOC2O75106 756 aa6.15□□□□□ -1.42
TOPBP1-208ENST00000511439 USPL1Q5W0Q7 1092 aa6.15□□□□□ -1.42
TOPBP1-208ENST00000511439 GATA6Q92908 595 aa6.15□□□□□ -1.42
TOPBP1-208ENST00000511439 DMRTB1Q96MA1 342 aa6.15□□□□□ -1.42
TOPBP1-208ENST00000511439 NUP160Q12769 1436 aa6.15□□□□□ -1.43
TOPBP1-208ENST00000511439 GRIN2AQ12879 1464 aa6.15□□□□□ -1.43
TOPBP1-208ENST00000511439 IQSEC2Q5JU85 1478 aa6.15□□□□□ -1.43
TOPBP1-208ENST00000511439 KIF21BO75037 1637 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 FAM170BA6NMN3 283 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 GPR182O15218 404 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 GADD45BO75293 160 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 CTSBP07858 339 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 SLFN14P0C7P3 912 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 HSPA2P54652 639 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 ORC1Q13415 861 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 ZSCAN29Q8IWY8 852 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 TMC1Q8TDI8 760 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 CCDC74AQ96AQ1 378 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 ALKBH8Q96BT7 664 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 FAM105AQ9NUU6 356 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 PPP4R2Q9NY27 417 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 PRG4Q92954 1404 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 PBRM1Q86U86 1689 aa6.14□□□□□ -1.43
TOPBP1-208ENST00000511439 EIF1AYO14602 144 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 TREHO43280 583 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 CYP27C1Q4G0S4 372 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 ZNF765Q7L2R6 523 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 SHISA5Q8N114 240 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 STK11IPQ8N1F8 1099 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 FLCNQ8NFG4 579 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 ASIC4Q96FT7 647 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 WDR18Q9BV38 432 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 ABCB6Q9NP58 842 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 CCDC9Q9Y3X0 531 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 DAGLAQ9Y4D2 1042 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 ADAMTSL3P82987 1691 aa6.13□□□□□ -1.43
TOPBP1-208ENST00000511439 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 ANKRD33BA6NCL7 494 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 JUNBP17275 347 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 ERCC3P19447 782 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 DSC3Q14574 896 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 OGFOD3Q6PK18 319 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 SEZ6L2Q6UXD5 910 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 CBLL1Q75N03 491 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 ATXN3LQ9H3M9 355 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 PIDD1Q9HB75 910 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 LRRC4CQ9HCJ2 640 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 KRT82Q9NSB4 513 aa6.12□□□□□ -1.43
TOPBP1-208ENST00000511439 ECEL1O95672 775 aa6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 XRCC5P13010 732 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 MISP3Q96FF7 219 aa6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 CSRNP1Q96S65 589 aa6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 NIF3L1Q9GZT8 377 aa6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 C1GALT1Q9NS00 363 aa6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 ZC3H7BQ9UGR2 993 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 SLC5A6Q9Y289 635 aa6.11□□□□□ -1.43
TOPBP1-208ENST00000511439 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 PLCB3Q01970 1234 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 ID3Q02535 119 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 FMR1Q06787 632 aaKnown RBP eCLIP6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 COL19A1Q14993 1142 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 DTHD1Q6ZMT9 781 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 NPAS4Q8IUM7 802 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 NLRP2Q9NX02 1062 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 CRIM1Q9NZV1 1036 aa6.1□□□□□ -1.43
TOPBP1-208ENST00000511439 PLB1Q6P1J6 1458 aa6.09□□□□□ -1.43
TOPBP1-208ENST00000511439 GRM2Q14416 872 aa6.09□□□□□ -1.43
TOPBP1-208ENST00000511439 NFXL1Q6ZNB6 911 aa6.09□□□□□ -1.43
TOPBP1-208ENST00000511439 PAK6Q9NQU5 681 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-208ENST00000511439 TMEM39AQ9NV64 488 aa6.09□□□□□ -1.43
TOPBP1-208ENST00000511439 PPP1R9AQ9ULJ8 1098 aa6.09□□□□□ -1.43
TOPBP1-208ENST00000511439 KIAA0586Q9BVV6 1533 aa6.09□□□□□ -1.44
TOPBP1-208ENST00000511439 MAP3K4Q9Y6R4 1608 aa6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 BIN1O00499 593 aa6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 GSTP1P09211 210 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 ITGB5P18084 799 aa6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 LIG1P18858 919 aa6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 KIF4BQ2VIQ3 1234 aa6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 RGS22Q8NE09 1264 aa6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 CCDC86Q9H6F5 360 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 GPN3Q9UHW5 284 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 FGD5Q6ZNL6 1462 aa6.08□□□□□ -1.44
TOPBP1-208ENST00000511439 MADDQ8WXG6 1647 aa6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 DYNC1LI2O43237 492 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 SMYD4Q8IYR2 804 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 GLIS3Q8NEA6 775 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms