RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PDZD3Q86UT5 571 aa5.41□□□□□ -1.54
TRAPPC11-207ENST00000511409 TRIM42Q8IWZ5 723 aa5.41□□□□□ -1.54
TRAPPC11-207ENST00000511409 UBASH3BQ8TF42 649 aa5.41□□□□□ -1.54
TRAPPC11-207ENST00000511409 C8orf37Q96NL8 207 aa5.41□□□□□ -1.54
TRAPPC11-207ENST00000511409 RAD18Q9NS91 495 aa5.41□□□□□ -1.54
TRAPPC11-207ENST00000511409 ADAMTS1Q9UHI8 967 aa5.41□□□□□ -1.54
TRAPPC11-207ENST00000511409 LOC100289279A0A1B0GTE1 492 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 TLR3O15455 904 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 BPNT1O95861 308 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 CTSBP07858 339 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 LIG1P18858 919 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 BNC2Q6ZN30 1099 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 ACAD11Q709F0 780 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 VPS37DQ86XT2 251 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 GPBAR1Q8TDU6 330 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 TP53INP1Q96A56 240 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 GPRASP2Q96D09 838 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 RUSC1Q9BVN2 902 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 CEP41Q9BYV8 373 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 CCDC86Q9H6F5 360 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 PCDHA4Q9UN74 947 aa5.4□□□□□ -1.54
TRAPPC11-207ENST00000511409 TRIM37O94972 964 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 WISP1O95388 367 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 F13A1P00488 732 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 DNAJA1P31689 397 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 PTPN11Q06124 597 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 ZNF252P-AS1Q0IIN9 211 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 APOBRQ0VD83 1088 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 PRR23CQ6ZRP0 262 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 FAM46AQ96IP4 442 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 EAF1Q96JC9 268 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 NRSN2Q9GZP1 204 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 KRT82Q9NSB4 513 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 UBP1Q9NZI7 540 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 USP35Q9P2H5 1018 aa5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 PPP1R1BQ9UD71 204 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 COL17A1Q9UMD9 1497 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-207ENST00000511409 ALX3O95076 343 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 DLGAP3O95886 979 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 SLFN14P0C7P3 912 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 GARTP22102 1010 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 MCM4P33991 863 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 AKAP4Q5JQC9 854 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 EXOSC6Q5RKV6 272 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 ANKRD34AQ69YU3 496 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 CCDC84Q86UT8 332 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 FBXO27Q8NI29 283 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 GATAD2BQ8WXI9 593 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 NKD1Q969G9 470 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 GAL3ST3Q96A11 431 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 FMNL2Q96PY5 1086 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 UBL7Q96S82 380 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 TINF2Q9BSI4 451 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 SUGCTQ9HAC7 445 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 PICK1Q9NRD5 415 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 CSADQ9Y600 493 aa5.38□□□□□ -1.55
TRAPPC11-207ENST00000511409 GREM1O60565 184 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 AOC2O75106 756 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 ARID5AQ03989 594 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 CWF19L2Q2TBE0 894 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 SEZ6Q53EL9 994 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 NUTM2GQ5VZR2 741 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 FAM196AQ6ZSG2 479 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 AGGF1Q8N302 714 aaeCLIP5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 ELMO3Q96BJ8 720 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 WDR89Q96FK6 387 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 NT5C1AQ9BXI3 368 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 TMPRSS13Q9BYE2 586 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 TANGO6Q9C0B7 1094 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 RNF208Q9H0X6 261 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 AP4E1Q9UPM8 1137 aa5.37□□□□□ -1.55
TRAPPC11-207ENST00000511409 DCDC2CA8MYV0 355 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 PAX4O43316 350 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 ZNF862O60290 1169 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 CILPO75339 1184 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 GLB1P16278 677 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 CRKP46108 304 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 GJA8P48165 433 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 RPL6Q02878 288 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 MPP2Q14168 576 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 WIPI1Q5MNZ9 446 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 SCARA3Q6AZY7 606 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 FDX2Q6P4F2 183 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 ARMC10Q8N2F6 343 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 C12orf50Q8NA57 414 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 SMG8Q8ND04 991 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 SREK1Q8WXA9 508 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 SPATA32Q96LK8 384 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 WDR18Q9BV38 432 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 CYP4F12Q9HCS2 524 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 KCNQ5Q9NR82 932 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 PRKAG2Q9UGJ0 569 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 EFR3BQ9Y2G0 817 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 HIF3AQ9Y2N7 669 aa5.36□□□□□ -1.55
TRAPPC11-207ENST00000511409 ROBO2Q9HCK4 1378 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 SYNGAP1Q96PV0 1343 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 PRAMEF27A3QJZ7 478 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 FAM221AA4D161 298 aa5.35□□□□□ -1.55
TRAPPC11-207ENST00000511409 DHX15O43143 795 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms