RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 HIP1O00291 1037 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 NCK2O43639 380 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 AOC2O75106 756 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 RARBP10826 455 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 GNAT2P19087 354 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 CHRNDQ07001 517 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 AAMPQ13685 434 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 NONOQ15233 471 aaKnown RBP eCLIP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 SCYL3Q8IZE3 742 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF296Q8WUU4 475 aaPredicted RBP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 C1QTNF1Q9BXJ1 281 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 TANGO6Q9C0B7 1094 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 MKNK2Q9HBH9 465 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 ANKRD26Q9UPS8 1709 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 SPDYE5A6NIY4 337 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 EYA2O00167 538 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 SLC34A2O95436 690 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 ZFYP08048 801 aaPredicted RBP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 RAG1P15918 1043 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 MKRN3Q13064 507 aaKnown RBP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 PTPROQ16827 1216 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 TKFCQ3LXA3 575 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 PUS10Q3MIT2 529 aaKnown RBP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 PLEKHH3Q7Z736 793 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 OPTNQ96CV9 577 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 GLT1D1Q96MS3 346 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 CCDC85AQ96PX6 553 aaPredicted RBP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 CSRNP1Q96S65 589 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 RNF41Q9H4P4 317 aaPredicted RBP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 C11orf49Q9H6J7 331 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 TOMM22Q9NS69 142 aa3.4□□□□□ -1.86
CLOCK-209ENST00000511124 FARP1Q9Y4F1 1045 aaPredicted RBP3.4□□□□□ -1.86
CLOCK-209ENST00000511124 DOT1LQ8TEK3 1739 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 CLRN2A0PK11 232 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 ASB14A6NK59 587 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 M0QZ92 97 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 DHX16O60231 1041 aaKnown RBP3.4□□□□□ -1.87
CLOCK-209ENST00000511124 TLR2O60603 784 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 TBC1D8O95759 1140 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 APPP05067 770 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 DZIP1LQ8IYY4 767 aaKnown RBP3.4□□□□□ -1.87
CLOCK-209ENST00000511124 FAM9BQ8IZU0 186 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 CD99L2Q8TCZ2 262 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 RUFY2Q8WXA3 655 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 EXOC4Q96A65 974 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 ARMC5Q96C12 935 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 ZBED2Q9BTP6 218 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 POLR3EQ9NVU0 708 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 MINPP1Q9UNW1 487 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 KIF20BQ96Q89 1820 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 LTN1O94822 1766 aa3.4□□□□□ -1.87
CLOCK-209ENST00000511124 KDM6AO15550 1401 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 MROH7-TTC4A0A0A0MT08 1334 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 RPTORQ8N122 1335 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 USP17L10C9JJH3 530 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 ADM5C9JUS6 153 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 BFSP2Q13515 415 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 ZKSCAN2Q63HK3 967 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 PSRC1Q6PGN9 363 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 CCDC146Q8IYE0 955 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 CUL5Q93034 780 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 THUMPD2Q9BTF0 503 aaKnown RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 MROH8Q9H579 483 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 RABGAP1Q9Y3P9 1069 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 SLC15A5A6NIM6 579 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 RAB11FIP3O75154 756 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 CIAO1O76071 339 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 GNAT1P11488 350 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 KCNA3P22001 575 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 SCNN1DP51172 638 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 IRF5Q13568 498 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 DCTN1Q14203 1278 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 PLS1Q14651 629 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 HLFQ16534 295 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 MAP3K11Q16584 847 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 FAM110CQ1W6H9 321 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 CPLX2Q6PUV4 134 aaKnown RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 RUFY4Q6ZNE9 571 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 KIAA1211Q6ZU35 1233 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 OTOP1Q7RTM1 612 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 APBB1IPQ7Z5R6 666 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 ZNF280CQ8ND82 737 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 FBXO22Q8NEZ5 403 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 LPAR1Q92633 364 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 CLUAP1Q96AJ1 413 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 PAGR1Q9BTK6 254 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 MIS18AQ9NYP9 233 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 ZHX2Q9Y6X8 837 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 SCN4AP35499 1836 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 TRAF5O00463 557 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 PFKMP08237 780 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 FCER1AP12319 257 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 PTPN12Q05209 780 aaKnown RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 HABP4Q5JVS0 413 aaKnown RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 SECISBP2LQ93073 1101 aaKnown RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 EDC3Q96F86 508 aaKnown RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 DNAI2Q9GZS0 605 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 BCL2L12Q9HB09 334 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 PRDM5Q9NQX1 630 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 FAM184BQ9ULE4 1060 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms