RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SHISA4Q96DD7 197 aa28.37■■■□□ 2.13
SMAD5-207ENST00000511116 PTPRAP18433 802 aa28.36■■■□□ 2.13
SMAD5-207ENST00000511116 ARHGAP45Q92619 1136 aa28.36■■■□□ 2.13
SMAD5-207ENST00000511116 PHIPQ8WWQ0 1821 aa28.36■■■□□ 2.13
SMAD5-207ENST00000511116 TIMM10P62072 90 aa28.35■■■□□ 2.13
SMAD5-207ENST00000511116 MTFR1Q15390 333 aa28.35■■■□□ 2.13
SMAD5-207ENST00000511116 SLC45A1Q9Y2W3 748 aa28.35■■■□□ 2.13
SMAD5-207ENST00000511116 AFG3L2Q9Y4W6 797 aa28.35■■■□□ 2.13
SMAD5-207ENST00000511116 MGAMO43451 1857 aa28.35■■■□□ 2.13
SMAD5-207ENST00000511116 DOCK1Q14185 1865 aa28.34■■■□□ 2.13
SMAD5-207ENST00000511116 MYCP01106 439 aaPredicted RBP28.34■■■□□ 2.13
SMAD5-207ENST00000511116 GRK4P32298 578 aa28.34■■■□□ 2.13
SMAD5-207ENST00000511116 RARSP54136 660 aaKnown RBP28.34■■■□□ 2.13
SMAD5-207ENST00000511116 FASTKD5Q7L8L6 764 aaKnown RBP28.34■■■□□ 2.13
SMAD5-207ENST00000511116 SLF2Q8IX21 1173 aa28.34■■■□□ 2.13
SMAD5-207ENST00000511116 DDX4Q9NQI0 724 aaKnown RBP28.34■■■□□ 2.13
SMAD5-207ENST00000511116 ZHX2Q9Y6X8 837 aa28.34■■■□□ 2.13
SMAD5-207ENST00000511116 A0A1B0GUL7 405 aa28.33■■■□□ 2.13
SMAD5-207ENST00000511116 DDTLA6NHG4 134 aaPredicted RBP28.33■■■□□ 2.13
SMAD5-207ENST00000511116 NPM3O75607 178 aaKnown RBP28.33■■■□□ 2.13
SMAD5-207ENST00000511116 FMNL1O95466 1100 aaPredicted RBP28.33■■■□□ 2.13
SMAD5-207ENST00000511116 CYP2C8P10632 490 aa28.33■■■□□ 2.13
SMAD5-207ENST00000511116 SPTY2D1Q68D10 685 aaPredicted RBP28.33■■■□□ 2.13
SMAD5-207ENST00000511116 DZIP1Q86YF9 867 aaKnown RBP28.33■■■□□ 2.13
SMAD5-207ENST00000511116 ZNF384Q8TF68 577 aa28.33■■■□□ 2.13
SMAD5-207ENST00000511116 MROH7-TTC4A0A0A0MT08 1334 aa28.33■■■□□ 2.13
SMAD5-207ENST00000511116 MYPNQ86TC9 1320 aa28.33■■■□□ 2.13
SMAD5-207ENST00000511116 TRIOBPQ9H2D6 2365 aa28.32■■■□□ 2.12
SMAD5-207ENST00000511116 FXR1P51114 621 aaKnown RBP eCLIP28.32■■■□□ 2.12
SMAD5-207ENST00000511116 UBE2Q1Q7Z7E8 422 aa28.32■■■□□ 2.12
SMAD5-207ENST00000511116 RAET1EQ8TD07 263 aa28.32■■■□□ 2.12
SMAD5-207ENST00000511116 XAGE2Q96GT9 111 aa28.32■■■□□ 2.12
SMAD5-207ENST00000511116 PICK1Q9NRD5 415 aa28.32■■■□□ 2.12
SMAD5-207ENST00000511116 AKAP2Q9Y2D5 859 aa28.32■■■□□ 2.12
SMAD5-207ENST00000511116 GPR75-ASB3A0A0A6YYF3 556 aa28.31■■■□□ 2.12
SMAD5-207ENST00000511116 CTNND1O60716 968 aaKnown RBP28.31■■■□□ 2.12
SMAD5-207ENST00000511116 GNAI3P08754 354 aa28.31■■■□□ 2.12
SMAD5-207ENST00000511116 BTDP43251 543 aa28.31■■■□□ 2.12
SMAD5-207ENST00000511116 RHBDL3P58872 404 aa28.31■■■□□ 2.12
SMAD5-207ENST00000511116 MVPQ14764 893 aaKnown RBP28.31■■■□□ 2.12
SMAD5-207ENST00000511116 ABCF2Q9UG63 623 aa28.31■■■□□ 2.12
SMAD5-207ENST00000511116 TBC1D12O60347 775 aa28.3■■■□□ 2.12
SMAD5-207ENST00000511116 GJB1P08034 283 aa28.3■■■□□ 2.12
SMAD5-207ENST00000511116 FCGRTP55899 365 aa28.3■■■□□ 2.12
SMAD5-207ENST00000511116 TFCP2Q12800 502 aa28.3■■■□□ 2.12
SMAD5-207ENST00000511116 NKX2-3Q8TAU0 364 aa28.3■■■□□ 2.12
SMAD5-207ENST00000511116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.3■■■□□ 2.12
SMAD5-207ENST00000511116 RANBP2P49792 3224 aaKnown RBP28.3■■■□□ 2.12
SMAD5-207ENST00000511116 COL2A1P02458 1487 aaPredicted RBP28.29■■■□□ 2.12
SMAD5-207ENST00000511116 SRGAP3O43295 1099 aa28.29■■■□□ 2.12
SMAD5-207ENST00000511116 ECM2O94769 699 aaPredicted RBP28.29■■■□□ 2.12
SMAD5-207ENST00000511116 GJA8P48165 433 aa28.29■■■□□ 2.12
SMAD5-207ENST00000511116 MECOMQ03112 1051 aa28.29■■■□□ 2.12
SMAD5-207ENST00000511116 PRKCZQ05513 592 aa28.29■■■□□ 2.12
SMAD5-207ENST00000511116 COLQQ9Y215 455 aaPredicted RBP28.29■■■□□ 2.12
SMAD5-207ENST00000511116 SLURP2P0DP57 97 aa28.28■■■□□ 2.12
SMAD5-207ENST00000511116 ZSCAN29Q8IWY8 852 aaPredicted RBP28.28■■■□□ 2.12
SMAD5-207ENST00000511116 H0YGN5 161 aa28.27■■■□□ 2.12
SMAD5-207ENST00000511116 MAP4K4O95819 1239 aaPredicted RBP28.27■■■□□ 2.12
SMAD5-207ENST00000511116 CCL5P13501 91 aa28.27■■■□□ 2.12
SMAD5-207ENST00000511116 ERICH6Q7L0X2 663 aa28.27■■■□□ 2.12
SMAD5-207ENST00000511116 SLAIN1Q8ND83 568 aa28.27■■■□□ 2.12
SMAD5-207ENST00000511116 HMG20BQ9P0W2 317 aa28.27■■■□□ 2.12
SMAD5-207ENST00000511116 ARID4AP29374 1257 aaPredicted RBP28.25■■■□□ 2.11
SMAD5-207ENST00000511116 PICALMQ13492 652 aa28.25■■■□□ 2.11
SMAD5-207ENST00000511116 NSUN4Q96CB9 384 aaKnown RBP28.25■■■□□ 2.11
SMAD5-207ENST00000511116 GABRQQ9UN88 632 aa28.25■■■□□ 2.11
SMAD5-207ENST00000511116 UBXN2AP68543 259 aa28.24■■■□□ 2.11
SMAD5-207ENST00000511116 GADL1Q6ZQY3 521 aa28.24■■■□□ 2.11
SMAD5-207ENST00000511116 AGTPBP1Q9UPW5 1226 aa28.24■■■□□ 2.11
SMAD5-207ENST00000511116 IRF5Q13568 498 aa28.23■■■□□ 2.11
SMAD5-207ENST00000511116 SPATA5Q8NB90 893 aa28.23■■■□□ 2.11
SMAD5-207ENST00000511116 RNF208Q9H0X6 261 aa28.23■■■□□ 2.11
SMAD5-207ENST00000511116 LOC285556D6RIA3 1793 aa28.22■■■□□ 2.11
SMAD5-207ENST00000511116 PI16Q6UXB8 463 aa28.22■■■□□ 2.11
SMAD5-207ENST00000511116 PXYLP1Q8TE99 480 aa28.22■■■□□ 2.11
SMAD5-207ENST00000511116 OSBPL5Q9H0X9 879 aaPredicted RBP28.22■■■□□ 2.11
SMAD5-207ENST00000511116 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.22■■■□□ 2.11
SMAD5-207ENST00000511116 TRIM75PA6NK02 468 aa28.21■■■□□ 2.11
SMAD5-207ENST00000511116 LDHCP07864 332 aa28.21■■■□□ 2.11
SMAD5-207ENST00000511116 TRIM27P14373 513 aa28.21■■■□□ 2.11
SMAD5-207ENST00000511116 FLT3LGP49771 235 aa28.21■■■□□ 2.11
SMAD5-207ENST00000511116 GSTO1P78417 241 aa28.21■■■□□ 2.11
SMAD5-207ENST00000511116 DOCK3Q8IZD9 2030 aa28.21■■■□□ 2.11
SMAD5-207ENST00000511116 SZT2Q5T011 3432 aa28.21■■■□□ 2.11
SMAD5-207ENST00000511116 CCER2I3L3R5 266 aa28.2■■■□□ 2.1
SMAD5-207ENST00000511116 CCDC84Q86UT8 332 aaPredicted RBP28.2■■■□□ 2.1
SMAD5-207ENST00000511116 PROCA1Q8NCQ7 364 aaPredicted RBP28.2■■■□□ 2.1
SMAD5-207ENST00000511116 U2AF1L4Q8WU68 220 aaKnown RBP28.2■■■□□ 2.1
SMAD5-207ENST00000511116 NEUROD6Q96NK8 337 aa28.2■■■□□ 2.1
SMAD5-207ENST00000511116 ADCY3O60266 1144 aa28.19■■■□□ 2.1
SMAD5-207ENST00000511116 CAPN2P17655 700 aa28.19■■■□□ 2.1
SMAD5-207ENST00000511116 SMCR8Q8TEV9 937 aaPredicted RBP28.19■■■□□ 2.1
SMAD5-207ENST00000511116 TBC1D2Q9BYX2 928 aa28.19■■■□□ 2.1
SMAD5-207ENST00000511116 UNC93B1Q9H1C4 597 aa28.19■■■□□ 2.1
SMAD5-207ENST00000511116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.19■■■□□ 2.1
SMAD5-207ENST00000511116 BIN2Q9UBW5 565 aaPredicted RBP28.19■■■□□ 2.1
SMAD5-207ENST00000511116 ATAD5Q96QE3 1844 aa28.18■■■□□ 2.1
SMAD5-207ENST00000511116 PNMA6EA0A0J9YXQ4 647 aa28.18■■■□□ 2.1
SMAD5-207ENST00000511116 GNAI2P04899 355 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms