RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
MBD4-209ENST00000511009 CILPO75339 1184 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 ELNP15502 786 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 EPHA1P21709 976 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 GSTM4Q03013 218 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
MBD4-209ENST00000511009 SERINC3Q13530 473 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 RAB33AQ14088 237 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 ADGRE1Q14246 886 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 NKAPLQ5M9Q1 402 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 MAP1SQ66K74 1059 aaPredicted RBP6.87□□□□□ -1.31
MBD4-209ENST00000511009 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 ZNF746Q6NUN9 644 aaPredicted RBP6.87□□□□□ -1.31
MBD4-209ENST00000511009 ADAMTSL4Q6UY14 1074 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 STK35Q8TDR2 534 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 SLC7A3Q8WY07 619 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 KCNB2Q92953 911 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 SHDQ96IW2 340 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 BRMS1Q9HCU9 246 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 TBX22Q9Y458 520 aa6.87□□□□□ -1.31
MBD4-209ENST00000511009 PPM1GO15355 546 aaPredicted RBP6.86□□□□□ -1.31
MBD4-209ENST00000511009 KLF4O43474 513 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
MBD4-209ENST00000511009 DEAF1O75398 565 aaPredicted RBP6.86□□□□□ -1.31
MBD4-209ENST00000511009 CLSTN1O94985 981 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 GSTP1P09211 210 aaKnown RBP6.86□□□□□ -1.31
MBD4-209ENST00000511009 IMPDH2P12268 514 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 GATA4P43694 442 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
MBD4-209ENST00000511009 TRAPPC3LQ5T215 181 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 IL22RA1Q8N6P7 574 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 OR6P1Q8NGX9 317 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 ACSBG1Q96GR2 724 aa6.86□□□□□ -1.31
MBD4-209ENST00000511009 CCDC85CA6NKD9 419 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 SOX1O00570 391 aaPredicted RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 TM4SF5O14894 197 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 TRIM37O94972 964 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 RPL6Q02878 288 aaKnown RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 DOC2BQ14184 412 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 RSPO4Q2I0M5 234 aaPredicted RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 SCARA3Q6AZY7 606 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 SHISA2Q6UWI4 295 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 DMRTC2Q8IXT2 367 aaPredicted RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 GAL3ST3Q96A11 431 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 LENG1Q96BZ8 264 aaPredicted RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 CORO1BQ9BR76 489 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 SSBP4Q9BWG4 385 aaPredicted RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 ZC3H12CQ9C0D7 883 aaKnown RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 SOX17Q9H6I2 414 aaPredicted RBP6.85□□□□□ -1.31
MBD4-209ENST00000511009 TPSG1Q9NRR2 321 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 ACTR10Q9NZ32 417 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 PPME1Q9Y570 386 aa6.85□□□□□ -1.31
MBD4-209ENST00000511009 CYP11A1P05108 521 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 CDK11BP21127 795 aaKnown RBP6.84□□□□□ -1.31
MBD4-209ENST00000511009 GIPRP48546 466 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 PIP4K2BP78356 416 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 CLCQ05315 142 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 ZNF252P-AS1Q0IIN9 211 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 C19orf57Q0VDD7 668 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 JAZF1Q86VZ6 243 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 FBXO11Q86XK2 927 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 DTWD1Q8N5C7 304 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 DEPDC7Q96QD5 511 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 PCDHB14Q9Y5E9 798 aa6.84□□□□□ -1.31
MBD4-209ENST00000511009 PPP2R5EQ16537 467 aa6.83□□□□□ -1.32
MBD4-209ENST00000511009 TXNDC11Q6PKC3 985 aa6.83□□□□□ -1.32
MBD4-209ENST00000511009 PDZD3Q86UT5 571 aa6.83□□□□□ -1.32
MBD4-209ENST00000511009 SNTG2Q9NY99 539 aa6.83□□□□□ -1.32
MBD4-209ENST00000511009 PCDHA4Q9UN74 947 aa6.83□□□□□ -1.32
MBD4-209ENST00000511009 MRPL42Q9Y6G3 142 aaKnown RBP6.83□□□□□ -1.32
MBD4-209ENST00000511009 C9orf172C9J069 976 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 LINC01387J3KSC0 135 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 DLL1O00548 723 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 GRIN3BO60391 1043 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 APBA3O96018 575 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 PTPN11Q06124 597 aaPredicted RBP6.82□□□□□ -1.32
MBD4-209ENST00000511009 MLECQ14165 292 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 PDE3AQ14432 1141 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 POU4F3Q15319 338 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 LARP1BQ659C4 914 aaKnown RBP6.82□□□□□ -1.32
MBD4-209ENST00000511009 MPRIPQ6WCQ1 1025 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 LRP10Q7Z4F1 713 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 FAM169BQ8N8A8 192 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 GPBAR1Q8TDU6 330 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 WNT8BQ93098 351 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 NACC1Q96RE7 527 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 ST7Q9NRC1 585 aa6.82□□□□□ -1.32
MBD4-209ENST00000511009 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.82□□□□□ -1.32
MBD4-209ENST00000511009 RAC1P63000 192 aa6.81□□□□□ -1.32
MBD4-209ENST00000511009 IFRD2Q12894 506 aaPredicted RBP6.81□□□□□ -1.32
MBD4-209ENST00000511009 FXNQ16595 210 aa6.81□□□□□ -1.32
MBD4-209ENST00000511009 WIPI1Q5MNZ9 446 aaPredicted RBP6.81□□□□□ -1.32
MBD4-209ENST00000511009 HGSNATQ68CP4 663 aa6.81□□□□□ -1.32
MBD4-209ENST00000511009 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.81□□□□□ -1.32
MBD4-209ENST00000511009 ZNF662Q6ZS27 426 aa6.81□□□□□ -1.32
MBD4-209ENST00000511009 LSRQ86X29 649 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms