RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
KDM3B-207ENST00000510866 HARSP12081 509 aaKnown RBP8.11□□□□□ -1.11
KDM3B-207ENST00000510866 CTAGE1Q96RT6 745 aa8.11□□□□□ -1.11
KDM3B-207ENST00000510866 MYL10Q9BUA6 226 aa8.11□□□□□ -1.11
KDM3B-207ENST00000510866 GLT8D2Q9H1C3 349 aa8.11□□□□□ -1.11
KDM3B-207ENST00000510866 SRP68Q9UHB9 627 aaKnown RBP8.11□□□□□ -1.11
KDM3B-207ENST00000510866 GSTTP1A0A1W2PQM5 241 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 PRAMEF22A3QJZ6 481 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 ATP5JP18859 108 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 TAF12Q16514 161 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 DALRD3Q5D0E6 543 aaKnown RBP8.1□□□□□ -1.11
KDM3B-207ENST00000510866 CFBP00751 764 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 GSDMDP57764 484 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 NCAPH2Q6IBW4 605 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 FERMT1Q9BQL6 677 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.115e-7■□□□□ 10.9
KDM3B-207ENST00000510866 RIMBP3CA6NJZ7 1639 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 RIMBP3BA6NNM3 1639 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 IQGAP3Q86VI3 1631 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 RIMBP3Q9UFD9 1639 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 CCDC169A6NNP5 214 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
KDM3B-207ENST00000510866 GIGYF2Q6Y7W6 1299 aaKnown RBP8.1□□□□□ -1.11
KDM3B-207ENST00000510866 RGS22Q8NE09 1264 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 CERKQ8TCT0 537 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 LZTS2Q9BRK4 669 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 PAFAH1B1P43034 410 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 UBASH3AP57075 661 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 ANO6Q4KMQ2 910 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 PLEKHF1Q96S99 279 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 USP44Q9H0E7 712 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 AZI2Q9H6S1 392 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 DBNDD1Q9H9R9 158 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 INCENPQ9NQS7 918 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 TRMT1Q9NXH9 659 aaKnown RBP8.1□□□□□ -1.11
KDM3B-207ENST00000510866 SNX14Q9Y5W7 946 aa8.1□□□□□ -1.11
KDM3B-207ENST00000510866 BICDL2A1A5D9 508 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 HOOK3Q86VS8 718 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 CCDC65Q8IXS2 484 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 SNX21Q969T3 373 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 NCOA5Q9HCD5 579 aaKnown RBP8.09□□□□□ -1.11
KDM3B-207ENST00000510866 SLC5A4Q9NY91 659 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 LEMD3Q9Y2U8 911 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 PLA2R1Q13018 1463 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 CLTCL1P53675 1640 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 CLRN2A0PK11 232 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 C8orf34Q49A92 452 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 CERKLQ49MI3 558 aaPredicted RBP8.09□□□□□ -1.11
KDM3B-207ENST00000510866 EDC3Q96F86 508 aaKnown RBP8.09□□□□□ -1.11
KDM3B-207ENST00000510866 UIMC1Q96RL1 719 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 DACT1Q9NYF0 836 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 GINS2Q9Y248 185 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 USP17L12C9JPN9 530 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 USP17L21D6R901 530 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 KIF2AO00139 706 aaPredicted RBP8.09□□□□□ -1.11
KDM3B-207ENST00000510866 URI1O94763 535 aaPredicted RBP8.09□□□□□ -1.11
KDM3B-207ENST00000510866 TXKP42681 527 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 SDR42E1Q8WUS8 393 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 HEG1Q9ULI3 1381 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
KDM3B-207ENST00000510866 TNS3Q68CZ2 1445 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 LMAN1P49257 510 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 CCDC93Q567U6 631 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 TMC4Q7Z404 712 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 CHURC1Q8WUH1 139 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 IFT74Q96LB3 600 aa8.09□□□□□ -1.11
KDM3B-207ENST00000510866 FRMPD2Q68DX3 1309 aaPredicted RBP8.09□□□□□ -1.11
KDM3B-207ENST00000510866 ARHGAP31Q2M1Z3 1444 aa8.09□□□□□ -1.12
KDM3B-207ENST00000510866 ADCY5O95622 1261 aa8.09□□□□□ -1.12
KDM3B-207ENST00000510866 SMTNP53814 917 aa8.09□□□□□ -1.12
KDM3B-207ENST00000510866 PABPC4Q13310 644 aaKnown RBP eCLIP8.09□□□□□ -1.124e-7■■■■□ 23.6
KDM3B-207ENST00000510866 ZSCAN23Q3MJ62 389 aa8.09□□□□□ -1.12
KDM3B-207ENST00000510866 HAUS3Q68CZ6 603 aa8.09□□□□□ -1.12
KDM3B-207ENST00000510866 SEC31BQ9NQW1 1179 aa8.09□□□□□ -1.12
KDM3B-207ENST00000510866 ABCC4O15439 1325 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 ADGRB3O60242 1522 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 ERICH4A6NGS2 130 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 AKR1B10O60218 316 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 DKC1O60832 514 aaKnown RBP eCLIP8.08□□□□□ -1.12
KDM3B-207ENST00000510866 IFI16Q16666 785 aaKnown RBP8.08□□□□□ -1.12
KDM3B-207ENST00000510866 IQUBQ8NA54 791 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 SGSM2O43147 1006 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 RBM6P78332 1123 aaKnown RBP8.08□□□□□ -1.12
KDM3B-207ENST00000510866 SPAG1Q07617 926 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 TICAM2Q86XR7 235 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 PUS3Q9BZE2 481 aaKnown RBP8.08□□□□□ -1.12
KDM3B-207ENST00000510866 CCDC113Q9H0I3 377 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
KDM3B-207ENST00000510866 BBOX1O75936 387 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 KIF4AO95239 1232 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 STRN3Q13033 797 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 UBE4AQ14139 1066 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 MAEAQ7L5Y9 396 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 AOPEPQ8N6M6 819 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 UBXN4Q92575 508 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 DSCC1Q9BVC3 393 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 ALKQ9UM73 1620 aa8.08□□□□□ -1.12
KDM3B-207ENST00000510866 ARHGEF35A5YM69 484 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms