RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 EAF2Q96CJ1 260 aaPredicted RBP28.18■■■□□ 2.1
SNF8-209ENST00000510558 ZNF512BQ96KM6 892 aaPredicted RBP28.18■■■□□ 2.1
SNF8-209ENST00000510558 CCDC8Q9H0W5 538 aaPredicted RBP28.18■■■□□ 2.1
SNF8-209ENST00000510558 TLR7Q9NYK1 1049 aaKnown RBP28.18■■■□□ 2.1
SNF8-209ENST00000510558 ATRNL1Q5VV63 1379 aa28.18■■■□□ 2.1
SNF8-209ENST00000510558 PPIL2Q13356 520 aa28.17■■■□□ 2.1
SNF8-209ENST00000510558 PICALMQ13492 652 aa28.17■■■□□ 2.1
SNF8-209ENST00000510558 PKN2Q16513 984 aaKnown RBP28.17■■■□□ 2.1
SNF8-209ENST00000510558 SH3BP5LQ7L8J4 393 aa28.17■■■□□ 2.1
SNF8-209ENST00000510558 ERC1Q8IUD2 1116 aa28.17■■■□□ 2.1
SNF8-209ENST00000510558 IRF6O14896 467 aa28.16■■■□□ 2.1
SNF8-209ENST00000510558 CETPP11597 493 aa28.15■■■□□ 2.1
SNF8-209ENST00000510558 PPATQ06203 517 aa28.15■■■□□ 2.1
SNF8-209ENST00000510558 SNAPC2Q13487 334 aa28.15■■■□□ 2.1
SNF8-209ENST00000510558 ZBTB40Q9NUA8 1239 aa28.15■■■□□ 2.1
SNF8-209ENST00000510558 DDTLA6NHG4 134 aaPredicted RBP28.14■■■□□ 2.1
SNF8-209ENST00000510558 MAP4K4O95819 1239 aaPredicted RBP28.14■■■□□ 2.1
SNF8-209ENST00000510558 CYP2E1P05181 493 aaPredicted RBP28.14■■■□□ 2.1
SNF8-209ENST00000510558 NOL9Q5SY16 702 aaKnown RBP28.14■■■□□ 2.1
SNF8-209ENST00000510558 NPM3O75607 178 aaKnown RBP28.13■■■□□ 2.09
SNF8-209ENST00000510558 ZAP70P43403 619 aa28.13■■■□□ 2.09
SNF8-209ENST00000510558 TAF1CQ15572 869 aaPredicted RBP28.13■■■□□ 2.09
SNF8-209ENST00000510558 HSP90AB4PQ58FF6 505 aa28.13■■■□□ 2.09
SNF8-209ENST00000510558 NAA16Q6N069 864 aaPredicted RBP28.13■■■□□ 2.09
SNF8-209ENST00000510558 RPAP2Q8IXW5 612 aaPredicted RBP28.13■■■□□ 2.09
SNF8-209ENST00000510558 FAM43AQ8N2R8 423 aa28.13■■■□□ 2.09
SNF8-209ENST00000510558 HPS5Q9UPZ3 1129 aa28.12■■■□□ 2.09
SNF8-209ENST00000510558 DOCK1Q14185 1865 aa28.11■■■□□ 2.09
SNF8-209ENST00000510558 CDK5RAP2Q96SN8 1893 aa28.11■■■□□ 2.09
SNF8-209ENST00000510558 PHF20L1A8MW92 1017 aa28.11■■■□□ 2.09
SNF8-209ENST00000510558 MAP3K10Q02779 954 aa28.11■■■□□ 2.09
SNF8-209ENST00000510558 AACSQ86V21 672 aa28.11■■■□□ 2.09
SNF8-209ENST00000510558 NOL10Q9BSC4 688 aaKnown RBP28.11■■■□□ 2.09
SNF8-209ENST00000510558 CHMP4BQ9H444 224 aaKnown RBP28.11■■■□□ 2.09
SNF8-209ENST00000510558 ZFYVE28Q9HCC9 887 aa28.11■■■□□ 2.09
SNF8-209ENST00000510558 COL2A1P02458 1487 aaPredicted RBP28.1■■■□□ 2.09
SNF8-209ENST00000510558 BTBD19C9JJ37 291 aa28.1■■■□□ 2.09
SNF8-209ENST00000510558 HMMRO75330 724 aa28.1■■■□□ 2.09
SNF8-209ENST00000510558 FBXO46Q6PJ61 603 aaPredicted RBP28.1■■■□□ 2.09
SNF8-209ENST00000510558 SIRT2Q8IXJ6 389 aa28.1■■■□□ 2.09
SNF8-209ENST00000510558 TEX11Q8IYF3 940 aa28.1■■■□□ 2.09
SNF8-209ENST00000510558 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.1■■■□□ 2.09
SNF8-209ENST00000510558 RHPN1Q8TCX5 695 aa28.1■■■□□ 2.09
SNF8-209ENST00000510558 ERO1AQ96HE7 468 aa28.1■■■□□ 2.09
SNF8-209ENST00000510558 PIH1D3Q9NQM4 214 aaKnown RBP28.1■■■□□ 2.09
SNF8-209ENST00000510558 SLURP2P0DP57 97 aa28.09■■■□□ 2.09
SNF8-209ENST00000510558 IL1RAPL2Q9NP60 686 aa28.09■■■□□ 2.09
SNF8-209ENST00000510558 ZCCHC17Q9NP64 241 aaKnown RBP28.09■■■□□ 2.09
SNF8-209ENST00000510558 KCNH4Q9UQ05 1017 aa28.09■■■□□ 2.09
SNF8-209ENST00000510558 FOCADQ5VW36 1801 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 IGSF3O75054 1194 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 RGS19P49795 217 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 SP3Q02447 781 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 PDE3AQ14432 1141 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 C20orf194Q5TEA3 1177 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 SCYL3Q8IZE3 742 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 CD99L2Q8TCZ2 262 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 SH3RF3Q8TEJ3 882 aaPredicted RBP28.08■■■□□ 2.09
SNF8-209ENST00000510558 OSBPL5Q9H0X9 879 aaPredicted RBP28.08■■■□□ 2.09
SNF8-209ENST00000510558 AATFQ9NY61 560 aaKnown RBP eCLIP28.08■■■□□ 2.098e-6■■■■□ 21.3
SNF8-209ENST00000510558 TRIM17Q9Y577 477 aa28.08■■■□□ 2.09
SNF8-209ENST00000510558 BAG3O95817 575 aa28.07■■■□□ 2.08
SNF8-209ENST00000510558 OTOP1Q7RTM1 612 aa28.07■■■□□ 2.08
SNF8-209ENST00000510558 APBB1O00213 710 aa28.06■■■□□ 2.08
SNF8-209ENST00000510558 PLCG2P16885 1265 aa28.06■■■□□ 2.08
SNF8-209ENST00000510558 ADGRA1Q86SQ6 560 aa28.06■■■□□ 2.08
SNF8-209ENST00000510558 KIF1BPQ96EK5 621 aa28.06■■■□□ 2.08
SNF8-209ENST00000510558 PICK1Q9NRD5 415 aa28.06■■■□□ 2.08
SNF8-209ENST00000510558 PHIPQ8WWQ0 1821 aa28.06■■■□□ 2.08
SNF8-209ENST00000510558 TBC1D12O60347 775 aa28.05■■■□□ 2.08
SNF8-209ENST00000510558 PTPRFP10586 1907 aa28.05■■■□□ 2.08
SNF8-209ENST00000510558 PPP4CP60510 307 aa28.05■■■□□ 2.08
SNF8-209ENST00000510558 NDUFB9Q9Y6M9 179 aa28.05■■■□□ 2.08
SNF8-209ENST00000510558 CTNND1O60716 968 aaKnown RBP28.04■■■□□ 2.08
SNF8-209ENST00000510558 CLASRPQ8N2M8 674 aaKnown RBP28.04■■■□□ 2.08
SNF8-209ENST00000510558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.04■■■□□ 2.08
SNF8-209ENST00000510558 SIPA1L1O43166 1804 aa28.04■■■□□ 2.08
SNF8-209ENST00000510558 ATAD5Q96QE3 1844 aa28.04■■■□□ 2.08
SNF8-209ENST00000510558 FAM196BA6NMK8 535 aa28.03■■■□□ 2.08
SNF8-209ENST00000510558 CXCL11O14625 94 aa28.03■■■□□ 2.08
SNF8-209ENST00000510558 TLR2O60603 784 aa28.03■■■□□ 2.08
SNF8-209ENST00000510558 IDH1O75874 414 aaKnown RBP28.03■■■□□ 2.08
SNF8-209ENST00000510558 PTPRAP18433 802 aa28.03■■■□□ 2.08
SNF8-209ENST00000510558 SOX10P56693 466 aa28.03■■■□□ 2.08
SNF8-209ENST00000510558 ANKRD23Q86SG2 305 aa28.03■■■□□ 2.08
SNF8-209ENST00000510558 ZHX2Q9Y6X8 837 aa28.03■■■□□ 2.08
SNF8-209ENST00000510558 CYP7A1P22680 504 aa28.02■■■□□ 2.08
SNF8-209ENST00000510558 CAP1Q01518 475 aa28.02■■■□□ 2.08
SNF8-209ENST00000510558 MLLT1Q03111 559 aaPredicted RBP28.02■■■□□ 2.08
SNF8-209ENST00000510558 MOGSQ13724 837 aa28.02■■■□□ 2.08
SNF8-209ENST00000510558 ANTXR1Q9H6X2 564 aa28.02■■■□□ 2.08
SNF8-209ENST00000510558 EFCC1Q9HA90 598 aa28.02■■■□□ 2.08
SNF8-209ENST00000510558 RAB11FIP3O75154 756 aa28.01■■■□□ 2.07
SNF8-209ENST00000510558 TGFBRAP1Q8WUH2 860 aa28.01■■■□□ 2.07
SNF8-209ENST00000510558 PDHXO00330 501 aa28■■■□□ 2.07
SNF8-209ENST00000510558 MAPKAPK5Q8IW41 473 aa28■■■□□ 2.07
SNF8-209ENST00000510558 AFG3L2Q9Y4W6 797 aa28■■■□□ 2.07
SNF8-209ENST00000510558 ZSWIM8A7E2V4 1837 aa27.99■■■□□ 2.07
SNF8-209ENST00000510558 FLT1P17948 1338 aa27.99■■■□□ 2.07
SNF8-209ENST00000510558 IFIT2P09913 472 aaKnown RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms