RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 PPP1R12BO60237 982 aaPredicted RBP10.64□□□□□ -0.71
CAST-231ENST00000510245 THBS1P07996 1170 aa10.64□□□□□ -0.71
CAST-231ENST00000510245 ATP4AP20648 1035 aa10.64□□□□□ -0.71
CAST-231ENST00000510245 TXLNAP40222 546 aa10.64□□□□□ -0.71
CAST-231ENST00000510245 ZDHHC3Q9NYG2 299 aa10.64□□□□□ -0.71
CAST-231ENST00000510245 HACL1Q9UJ83 578 aa10.64□□□□□ -0.71
CAST-231ENST00000510245 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
CAST-231ENST00000510245 C21orf2O43822 256 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 EPHX2P34913 555 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 ZNF211Q13398 564 aaPredicted RBP10.63□□□□□ -0.71
CAST-231ENST00000510245 LBRQ14739 615 aaKnown RBP10.63□□□□□ -0.71
CAST-231ENST00000510245 SH3PXD2AQ5TCZ1 1133 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 PNMA8AQ86V59 439 aaPredicted RBP10.63□□□□□ -0.71
CAST-231ENST00000510245 ZSCAN1Q8NBB4 408 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 CRISPLD1Q9H336 500 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 ANO2Q9NQ90 1003 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 HCN4Q9Y3Q4 1203 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 GJA3Q9Y6H8 435 aa10.63□□□□□ -0.71
CAST-231ENST00000510245 SMG6Q86US8 1419 aaKnown RBP10.62□□□□□ -0.71
CAST-231ENST00000510245 A0A1W2PNR3 127 aa10.62□□□□□ -0.71
CAST-231ENST00000510245 GAS6Q14393 721 aa10.62□□□□□ -0.71
CAST-231ENST00000510245 NME9Q86XW9 330 aa10.62□□□□□ -0.71
CAST-231ENST00000510245 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 ABL1P00519 1130 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 CIAPIN1Q6FI81 312 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 ZIC5Q96T25 663 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 TAOK3Q9H2K8 898 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 TMOD3Q9NYL9 352 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 ASAP1Q9ULH1 1129 aa10.61□□□□□ -0.71
CAST-231ENST00000510245 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 POLRMTO00411 1230 aaKnown RBP10.6□□□□□ -0.71
CAST-231ENST00000510245 EML1O00423 815 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 RPS6KA4O75676 772 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 IGFBP4P22692 258 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 MTMR3Q13615 1198 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 NAA30Q147X3 362 aaPredicted RBP10.6□□□□□ -0.71
CAST-231ENST00000510245 C2CD5Q86YS7 1000 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 USHBP1Q8N6Y0 703 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 ZCCHC2Q9C0B9 1178 aaKnown RBP10.6□□□□□ -0.71
CAST-231ENST00000510245 NEUROD4Q9HD90 331 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 SRP68Q9UHB9 627 aaKnown RBP10.6□□□□□ -0.71
CAST-231ENST00000510245 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
CAST-231ENST00000510245 SOWAHDA6NJG2 315 aa10.59□□□□□ -0.71
CAST-231ENST00000510245 H0YIN7 160 aa10.59□□□□□ -0.71
CAST-231ENST00000510245 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
CAST-231ENST00000510245 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.71
CAST-231ENST00000510245 LTBP3Q9NS15 1303 aa10.58□□□□□ -0.71
CAST-231ENST00000510245 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
CAST-231ENST00000510245 CYP27B1O15528 508 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 MX2P20592 715 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 AMPHP49418 695 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 FIGNL1Q6PIW4 674 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 CTU1Q7Z7A3 348 aaKnown RBP10.58□□□□□ -0.72
CAST-231ENST00000510245 NLRP8Q86W28 1048 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 RGS22Q8NE09 1264 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 GTF3C2Q8WUA4 911 aaPredicted RBP10.58□□□□□ -0.72
CAST-231ENST00000510245 ABHD17AQ96GS6 310 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 CFHR5Q9BXR6 569 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 PHACTR1Q9C0D0 580 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 DNMT3AQ9Y6K1 912 aaPredicted RBP10.58□□□□□ -0.72
CAST-231ENST00000510245 SCN4AP35499 1836 aa10.58□□□□□ -0.72
CAST-231ENST00000510245 USP42Q9H9J4 1324 aaKnown RBP10.58□□□□□ -0.72
CAST-231ENST00000510245 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 H3BRB1 525 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 BNIP3LO60238 219 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 HOXC9P31274 260 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 FMR1Q06787 632 aaKnown RBP eCLIP10.57□□□□□ -0.72
CAST-231ENST00000510245 UBAP2LQ14157 1087 aaKnown RBP10.57□□□□□ -0.72
CAST-231ENST00000510245 NBPF6Q5VWK0 638 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 NBPF4Q96M43 638 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 TUT1Q9H6E5 874 aaKnown RBP10.57□□□□□ -0.72
CAST-231ENST00000510245 MAP3K19Q56UN5 1328 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 RNF123Q5XPI4 1314 aa10.57□□□□□ -0.72
CAST-231ENST00000510245 ATXN7O15265 892 aaPredicted RBP10.56□□□□□ -0.72
CAST-231ENST00000510245 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
CAST-231ENST00000510245 SRSF11Q05519 484 aaKnown RBP10.56□□□□□ -0.72
CAST-231ENST00000510245 CST9Q5W186 159 aa10.56□□□□□ -0.72
CAST-231ENST00000510245 LRRC69Q6ZNQ3 347 aa10.56□□□□□ -0.72
CAST-231ENST00000510245 FOXD4L4Q8WXT5 416 aaPredicted RBP10.56□□□□□ -0.72
CAST-231ENST00000510245 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
CAST-231ENST00000510245 C2orf49Q9BVC5 232 aaPredicted RBP10.56□□□□□ -0.72
CAST-231ENST00000510245 NSFL1CQ9UNZ2 370 aaKnown RBP10.56□□□□□ -0.72
CAST-231ENST00000510245 PCDHGC4Q9Y5F7 938 aa10.56□□□□□ -0.72
CAST-231ENST00000510245 ZNF541Q9H0D2 1346 aa10.56□□□□□ -0.72
CAST-231ENST00000510245 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
CAST-231ENST00000510245 CUL9Q8IWT3 2517 aa10.55□□□□□ -0.72
CAST-231ENST00000510245 KDRP35968 1356 aa10.55□□□□□ -0.72
CAST-231ENST00000510245 KHNYNO15037 678 aaKnown RBP10.55□□□□□ -0.72
CAST-231ENST00000510245 AKAP4Q5JQC9 854 aa10.55□□□□□ -0.72
CAST-231ENST00000510245 ALDH16A1Q8IZ83 802 aa10.55□□□□□ -0.72
CAST-231ENST00000510245 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
CAST-231ENST00000510245 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
CAST-231ENST00000510245 ATXN7L1Q9ULK2 861 aaPredicted RBP10.55□□□□□ -0.72
CAST-231ENST00000510245 DCDC2BA2VCK2 349 aa10.54□□□□□ -0.72
CAST-231ENST00000510245 FAM181BA6NEQ2 426 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms